AMTR_s00055p00220020 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00055.168

Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-6 component


Gene families : OG_01_0004085 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004085_tree ,
OG_02_0004491 (LandPlants) Phylogenetic Tree(s): OG_02_0004491_tree ,
OG_03_0005401 (SeedPlants) Phylogenetic Tree(s): OG_03_0005401_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00055p00220020
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001339.5 No alias Protein degradation.26S proteasome.20S core... 0.01 Archaeplastida
Cre26.g756797 No alias Protein degradation.26S proteasome.20S core... 0.03 Archaeplastida
GSVIVT01027613001 No alias Protein degradation.26S proteasome.20S core... 0.03 Archaeplastida
LOC_Os09g32800.1 No alias component beta type-6 of 26S proteasome 0.02 Archaeplastida
Mp1g12450.1 No alias component beta type-6 of 26S proteasome 0.02 Archaeplastida
Pp3c16_16960V3.1 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.02 Archaeplastida
Solyc02g084920.3.1 No alias component beta type-6 of 26S proteasome 0.02 Archaeplastida
Zm00001e010121_P001 No alias component beta type-6 of 26S proteasome 0.02 Archaeplastida
Zm00001e034624_P005 No alias component beta type-6 of 26S proteasome 0.03 Archaeplastida
GSVIVT01027613001 No alias Protein degradation.26S proteasome.20S core... 0.03 LandPlants
LOC_Os09g32800.1 No alias component beta type-6 of 26S proteasome 0.02 LandPlants
Mp1g12450.1 No alias component beta type-6 of 26S proteasome 0.02 LandPlants
Solyc02g084920.3.1 No alias component beta type-6 of 26S proteasome 0.02 LandPlants
Zm00001e010121_P001 No alias component beta type-6 of 26S proteasome 0.02 LandPlants
Zm00001e034624_P005 No alias component beta type-6 of 26S proteasome 0.03 LandPlants
GSVIVT01027613001 No alias Protein degradation.26S proteasome.20S core... 0.03 SeedPlants
LOC_Os09g32800.1 No alias component beta type-6 of 26S proteasome 0.02 SeedPlants
Solyc02g084920.3.1 No alias component beta type-6 of 26S proteasome 0.02 SeedPlants
Zm00001e010121_P001 No alias component beta type-6 of 26S proteasome 0.02 SeedPlants
Zm00001e034624_P005 No alias component beta type-6 of 26S proteasome 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 19 214
No external refs found!