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  5. Gb_24032

Gb_24032


Description : ECA1/2 clathrin coated vesicle adaptor protein


Gene families : OG0000273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_24032

Target Alias Description ECC score Gene Family Method Actions
AT4G25940 No alias ENTH/ANTH/VHS superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g50244 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000241.123 No alias Putative clathrin assembly protein At4g25940... 0.02 OrthoFinder output from all 47 species
Dac_g08894 No alias accessory protein *(PlCALM3) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01011704001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
GSVIVT01015603001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
Msp_g08117 No alias accessory protein *(PlCALM3) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g07861 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g007820.3.1 Solyc07g007820 Putative clathrin assembly protein At5g35200... 0.02 OrthoFinder output from all 47 species
Spa_g01342 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001222_P002 Zm00001e001222 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.04 OrthoFinder output from all 47 species
Zm00001e038481_P001 Zm00001e038481 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR011417 ANTH_dom 34 301
No external refs found!