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  5. Gb_23845

Gb_23845 (ATSIG1, SIGB, ATSIG2,...)


Aliases : ATSIG1, SIGB, ATSIG2, ABC1, SIG2, SIGA, SIG1

Description : basal transcription factor (Sigma)


Gene families : OG0000565 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000565_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_23845

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00072720 SIGF, SIG6,... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AMTR_s00011p00266100 SIGB, SIG2,... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00248060 SIGD, SIG4,... RNA biosynthesis.organelle... 0.02 OrthoFinder output from all 47 species
AMTR_s00056p00209700 SIGC, SIG3,... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AT1G64860 SIGB, SIG2,... sigma factor A 0.03 OrthoFinder output from all 47 species
AT2G36990 SIGF, SIG6,... RNApolymerase sigma-subunit F 0.04 OrthoFinder output from all 47 species
Adi_g013131 ATSIG1, SIGB,... basal Sigma-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g078223 ATSIG1, SIGB,... basal Sigma-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g088986 ATSIG1, SIGB,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01395 ATSIG1, SIGB,... basal Sigma-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g07913 ATSIG1, SIGB,... basal Sigma-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g09018 SIGB, SIG2,... basal Sigma-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g09050 SIGB, SIG2,... basal Sigma-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.15G078000.1 SIGB, SIG2,... basal Sigma-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cre03.g194950 ATSIG1, SIGB,... RNA biosynthesis.organelle... 0.02 OrthoFinder output from all 47 species
Dcu_g03021 ATSIG1, SIGB,... basal Sigma-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g05693 ATSIG1, SIGB,... basal Sigma-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01024261001 SIGB, SIG2,... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
Mp7g15030.1 SIGB, SIG2,... basal transcription factor (Sigma) 0.03 OrthoFinder output from all 47 species
Ore_g08024 ATSIG1, SIGB,... basal Sigma-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g32531 SIGB, SIG2,... basal Sigma-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g33804 ATSIG1, SIGB,... basal Sigma-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g13485 No alias basal Sigma-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g38609 No alias basal Sigma-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc03g097320.3.1 SIGB, SIG2,... basal transcription factor (Sigma) 0.02 OrthoFinder output from all 47 species
Solyc06g072710.3.1 SIGB, SIG2,... basal transcription factor (Sigma) 0.03 OrthoFinder output from all 47 species
Spa_g16166 ATSIG1, SIGB,... basal Sigma-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e021683_P001 SIGB, SIG2,... basal transcription factor (Sigma) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!