Aliases : REME1
Description : Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana (sp|q9si53|pp147_arath : 572.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00012p00252800 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g39530... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00046p00214930 | CRR22,... | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
AT3G23330 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
Adi_g004490 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g005790 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g104520 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g05049 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g06374 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g18410 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g19301 | OTP84 | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aob_g36879 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g67470 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.10G063700.1 | Ceric.10G063700 | not classified & original description: pacid=50612924... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.24G026700.1 | Ceric.24G026700 | not classified & original description: pacid=50628649... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.37G004200.1 | Ceric.37G004200 | not classified & original description: pacid=50616137... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g09645 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g47810 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01000178001 | No alias | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01008965001 | No alias | Pentatricopeptide repeat-containing protein At4g18520,... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01009227001 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01009574001 | OSB1 | Cell cycle.organelle machineries.DNA... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01010898001 | No alias | Pentatricopeptide repeat-containing protein At2g34400... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01033389001 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01036975001 | EMB2758 | Pentatricopeptide repeat-containing protein At4g33990... | 0.04 | OrthoFinder output from all 47 species | |
Gb_04420 | OTP86 | Pentatricopeptide repeat-containing protein At3g03580... | 0.05 | OrthoFinder output from all 47 species | |
Gb_06115 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.07 | OrthoFinder output from all 47 species | |
Gb_10713 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_11925 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
Gb_13100 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
Gb_15506 | CRR22 | RNA editing factor (OTP82) | 0.04 | OrthoFinder output from all 47 species | |
Gb_17095 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
Gb_19828 | No alias | RNA editing factor (OTP82) | 0.04 | OrthoFinder output from all 47 species | |
Gb_21442 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
Gb_38248 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.07 | OrthoFinder output from all 47 species | |
Gb_38417 | CRR2 | OTP70 plastidial RNA splicing factor | 0.04 | OrthoFinder output from all 47 species | |
Gb_41234 | OTP86 | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
Gb_41454 | No alias | Pentatricopeptide repeat-containing protein At4g18520,... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os01g60250.1 | LOC_Os01g60250 | Pentatricopeptide repeat-containing protein At3g14730... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g56400.1 | LOC_Os03g56400 | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g09530.1 | LOC_Os04g09530 | RNA editing factor (BLX) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g35650.1 | LOC_Os04g35650 | Pentatricopeptide repeat-containing protein At3g26540... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os04g41120.1 | LOC_Os04g41120 | Pentatricopeptide repeat-containing protein At4g38010... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g25280.1 | LOC_Os08g25280 | Pentatricopeptide repeat-containing protein At4g39530... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os10g34720.1 | LOI1, MEF11,... | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
Len_g04832 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g22400 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g35291 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g53944 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g58985 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_127785g0010 | REME1 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.03 | OrthoFinder output from all 47 species | |
MA_187514g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
MA_3612g0010 | CRR22 | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | OrthoFinder output from all 47 species | |
MA_381817g0020 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
MA_470025g0010 | No alias | Pentatricopeptide repeat-containing protein At3g57430,... | 0.05 | OrthoFinder output from all 47 species | |
MA_474261g0010 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.05 | OrthoFinder output from all 47 species | |
MA_615077g0010 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | OrthoFinder output from all 47 species | |
MA_77675g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
MA_8210920g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
MA_83898g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
Msp_g16214 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g40957 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g04943 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g15421 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g27954 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g38771 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g30175 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g13591 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g30413 | OTP84 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g64875 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Smo399 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g097850.1.1 | Solyc03g097850 | Pentatricopeptide repeat-containing protein At5g16860... | 0.04 | OrthoFinder output from all 47 species | |
Solyc06g053850.4.1 | Solyc06g053850 | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
Solyc06g066080.1.1 | OTP85, Solyc06g066080 | Pentatricopeptide repeat-containing protein At4g21065... | 0.07 | OrthoFinder output from all 47 species | |
Spa_g27883 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g29657 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Tin_g25647 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g30230 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Tin_g30255 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g35082 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g44069 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e001007_P001 | Zm00001e001007 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e001038_P001 | CRR2, Zm00001e001038 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e001918_P001 | EMB2758, Zm00001e001918 | Pentatricopeptide repeat-containing protein At4g33990... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e003605_P001 | DOT4, Zm00001e003605 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e007042_P001 | Zm00001e007042 | RNA editing factor (AEF1) | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e011467_P004 | emb1899, EMB175,... | Pentatricopeptide repeat-containing protein At5g03800... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e019482_P001 | Zm00001e019482 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e023333_P001 | Zm00001e023333 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e029186_P001 | Zm00001e029186 | Pentatricopeptide repeat-containing protein At1g19720... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e031660_P001 | Zm00001e031660 | Pentatricopeptide repeat-containing protein At4g14170... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e032242_P001 | Zm00001e032242 | Pentatricopeptide repeat-containing protein At1g18485... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e032485_P001 | EMB2744, Zm00001e032485 | Pentatricopeptide repeat-containing protein At5g39680... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e038850_P001 | EMB2758, Zm00001e038850 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e040418_P001 | Zm00001e040418 | Pentatricopeptide repeat-containing protein At3g05340... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e040920_P001 | Zm00001e040920 | Pentatricopeptide repeat-containing protein At3g26540... | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 306 | 331 |
IPR002885 | Pentatricopeptide_repeat | 475 | 501 |
IPR002885 | Pentatricopeptide_repeat | 406 | 430 |
IPR002885 | Pentatricopeptide_repeat | 130 | 177 |
IPR002885 | Pentatricopeptide_repeat | 332 | 380 |
IPR002885 | Pentatricopeptide_repeat | 231 | 277 |
IPR032867 | DYW_dom | 505 | 629 |
No external refs found! |