LOC_Os02g53820 (Os02g0778600)


Aliases : Os02g0778600

Description : 10.6.1 cell wall.degradation.cellulases and beta -1,4-glucanases glycosyl hydrolase 9A4 (GH9A4)


Gene families : OG_01_0000062 (Gene family) Phylogenetic Tree(s): OG0000062_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os02g53820
Cluster HCCA cluster: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT1G19940 AtGH9B5, GH9B5 glycosyl hydrolase 9B5 0.02 Gene family
AT1G23210 AtGH9B6, GH9B6 glycosyl hydrolase 9B6 0.02 Gene family
AT2G44560 GH9B11, AtGH9B11 glycosyl hydrolase 9B11 0.06 Gene family
AT3G43860 AtGH9A4, GH9A4 glycosyl hydrolase 9A4 0.09 Gene family
AT4G11050 AtGH9C3, GH9C3 glycosyl hydrolase 9C3 0.03 Gene family
AT4G24260 ATGH9A3, GH9A3, KOR3 glycosyl hydrolase 9A3 0.02 Gene family
GSVIVT01018619001 No alias 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
GSVIVT01019523001 No alias 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
MA_216572g0010 No alias 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
MA_42717g0010 No alias 26.3.4 misc.gluco-, galacto- and... 0.01 Gene family
Smo234652 PACid_15404650 No description available 0.01 Gene family
Solyc06g066120.3.1 Solyc06g066120.3 10.6.1 cell wall.degradation.cellulases and beta... 0.02 Gene family
Solyc08g083210.3.1 Solyc08g083210.3 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
Zm00001d014782 GRMZM2G153987 26.3.4 misc.gluco-, galacto- and... 0.09 Gene family

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan
BP GO:0005975 carbohydrate metabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 43 486
No external refs found!