Gb_22272

Description : effector receptor (NLR)

Gene families : OG0005746 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005746_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_22272
Cluster	HCCA: Cluster_529

Target	Alias	Description	ECC score	Gene Family Method
Gb_01055	No alias	effector receptor (NLR)	0.11	OrthoFinder output from all 47 species
Gb_04466	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Gb_04892	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
Gb_07603	No alias	effector receptor (NLR)	0.1	OrthoFinder output from all 47 species
Gb_07604	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
Gb_07607	No alias	effector receptor (NLR)	0.06	OrthoFinder output from all 47 species
Gb_16324	No alias	effector receptor (NLR)	0.08	OrthoFinder output from all 47 species
Gb_22712	No alias	effector receptor (NLR)	0.04	OrthoFinder output from all 47 species
Gb_24971	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
Gb_28150	No alias	effector receptor (NLR)	0.15	OrthoFinder output from all 47 species
Gb_29937	No alias	effector receptor (NLR)	0.04	OrthoFinder output from all 47 species
Gb_32682	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
Gb_37380	No alias	effector receptor (NLR)	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005506	iron ion binding	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	306	454
IPR000157	TIR_dom	120	279

External Links

No external refs found!