LOC_Os02g53690 (Os02g0776900)


Aliases : Os02g0776900

Description : 27.3.50 RNA.regulation of transcription.General Transcription Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower. growth-regulating factor 5 (GRF5)


Gene families : OG_01_0000333 (Gene family) Phylogenetic Tree(s): OG0000333_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os02g53690
Cluster HCCA cluster: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AT2G06200 GRF6, AtGRF6 growth-regulating factor 6 0.06 Gene family
AT2G36400 GRF3, AtGRF3 growth-regulating factor 3 0.05 Gene family
AT2G45480 GRF9, AtGRF9 growth-regulating factor 9 0.08 Gene family
AT3G13960 GRF5, AtGRF5 growth-regulating factor 5 0.03 Gene family
AT3G52910 GRF4, AtGRF4 growth-regulating factor 4 0.06 Gene family
GSVIVT01015095001 No alias 27.3.50 RNA.regulation of transcription.General... 0.02 Gene family
GSVIVT01024326001 No alias 27.3.50 RNA.regulation of transcription.General... 0.09 Gene family
GSVIVT01027535001 No alias 27.3.50 RNA.regulation of transcription.General... 0.02 Gene family
LOC_Os06g02560 Os06g0116200 27.3.50 RNA.regulation of transcription.General... 0.03 Gene family
Solyc01g091540.2.1 Solyc01g091540.2 27.3.83 RNA.regulation of transcription.GRF zinc finger... 0.02 Gene family
Solyc03g082430.1.1 Solyc03g082430.1 35.2 not assigned.unknown Growth regulating factor... 0.05 Gene family
Solyc08g005430.3.1 Solyc08g005430.3 27.3.50 RNA.regulation of transcription.General... 0.06 Gene family
Solyc08g075950.2.1 Solyc08g075950.2 27.3.50 RNA.regulation of transcription.General... 0.04 Gene family
Solyc09g009200.2.1 Solyc09g009200.2 27.3.50 RNA.regulation of transcription.General... 0.02 Gene family
Solyc10g083510.2.1 Solyc10g083510.2 27.3.50 RNA.regulation of transcription.General... 0.03 Gene family
Solyc12g096070.2.1 Solyc12g096070.2 27.3.50 RNA.regulation of transcription.General... 0.02 Gene family
Zm00001d017602 GRMZM2G045977 27.3.50 RNA.regulation of transcription.General... 0.04 Gene family
Zm00001d018260 GRMZM5G893117 27.3.50 RNA.regulation of transcription.General... 0.02 Gene family
Zm00001d037117 GRMZM5G850129 27.3.50 RNA.regulation of transcription.General... 0.09 Gene family
Zm00001d045533 GRMZM2G119359 27.3.50 RNA.regulation of transcription.General... 0.03 Gene family
Zm00001d051456 GRMZM2G124566 27.3.50 RNA.regulation of transcription.General... 0.1 Gene family
Zm00001d052112 GRMZM2G105335 27.3.50 RNA.regulation of transcription.General... 0.07 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR014977 WRC_dom 91 133
IPR014978 Gln-Leu-Gln_QLQ 18 51
No external refs found!