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Gb_21909


Description : Protein transport protein Sec24-like At3g07100 OS=Arabidopsis thaliana (sp|q9sfu0|sc24a_arath : 81.6)


Gene families : OG0003840 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003840_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_21909

Target Alias Description ECC score Gene Family Method Actions
AT2G27460 No alias sec23/sec24 transport family protein 0.02 OrthoFinder output from all 47 species
Ala_g02268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g23056 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g34066 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g04931 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo440407 No alias Protein transport protein Sec24-like At3g07100... 0.04 OrthoFinder output from all 47 species
Spa_g09466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006896 Sec23/24_trunk_dom 48 175
IPR006900 Sec23/24_helical_dom 301 412
No external refs found!