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  5. Gb_21594

Gb_21594


Description : Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana (sp|q9c9a2|pp112_arath : 424.0)


Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_21594

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01026463001 No alias Pentatricopeptide repeat-containing protein At2g13420,... 0.04 OrthoFinder output from all 47 species
Len_g14239 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10316984g0010 No alias group-II intron mitochondrial splicing factor (MISF74) 0.08 OrthoFinder output from all 47 species
MA_196124g0010 No alias Pentatricopeptide repeat-containing protein At3g25210,... 0.05 OrthoFinder output from all 47 species
MA_201242g0020 No alias group-II intron mitochondrial splicing factor (MISF68) 0.03 OrthoFinder output from all 47 species
MA_39587g0010 No alias Pentatricopeptide repeat-containing protein At2g13420,... 0.04 OrthoFinder output from all 47 species
Solyc04g071280.3.1 Solyc04g071280 Pentatricopeptide repeat-containing protein At3g61360... 0.03 OrthoFinder output from all 47 species
Spa_g10895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015034_P001 Zm00001e015034 Pentatricopeptide repeat-containing protein At3g04130,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 494 538
IPR002885 Pentatricopeptide_repeat 421 468
IPR002885 Pentatricopeptide_repeat 351 397
IPR002885 Pentatricopeptide_repeat 280 327
IPR002885 Pentatricopeptide_repeat 215 244
IPR002885 Pentatricopeptide_repeat 249 278
No external refs found!