Aliases : CRR22
Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 692.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_21437 | |
Cluster | HCCA: Cluster_157 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00049p00220350 | OTP85,... | Pentatricopeptide repeat-containing protein At2g02980,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_18859 | CRR2 | Pentatricopeptide repeat-containing protein At1g20230... | 0.05 | OrthoFinder output from all 47 species | |
Len_g19027 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g53944 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
MA_104937g0010 | REME1 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.06 | OrthoFinder output from all 47 species | |
MA_137736g0010 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_38266g0010 | CRR22 | RNA editing factor (MEF19). RNA editing factor (OTP82) | 0.04 | OrthoFinder output from all 47 species | |
MA_615077g0010 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
MA_65500g0010 | No alias | Pentatricopeptide repeat-containing protein At1g08070,... | 0.05 | OrthoFinder output from all 47 species | |
MA_71104g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
MA_921g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.07 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR032867 | DYW_dom | 723 | 847 |
IPR002885 | Pentatricopeptide_repeat | 210 | 246 |
IPR002885 | Pentatricopeptide_repeat | 348 | 395 |
IPR002885 | Pentatricopeptide_repeat | 550 | 597 |
IPR002885 | Pentatricopeptide_repeat | 449 | 495 |
IPR002885 | Pentatricopeptide_repeat | 146 | 193 |
IPR002885 | Pentatricopeptide_repeat | 247 | 294 |
No external refs found! |