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  5. Gb_21319

Gb_21319 (TSB2)


Aliases : TSB2

Description : subunit beta of tryptophan synthase complex


Gene families : OG0002978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002978_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_21319
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020614.6 TRP2, TSB1, ATTSB1, TRPB Amino acid metabolism.biosynthesis.shikimate... 0.01 OrthoFinder output from all 47 species
MA_2478g0010 TSB2 Tryptophan synthase beta chain 2, chloroplastic... 0.03 OrthoFinder output from all 47 species
Msp_g42922 TRP2, TSB1, ATTSB1, TRPB EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06305 TRP2, TSB1, ATTSB1, TRPB EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18408 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001926 TrpB-like_PALP 145 474
No external refs found!