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  5. Gb_20979

Gb_20979 (ATRBP47C', RBP47C')


Aliases : ATRBP47C', RBP47C'

Description : Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia (sp|q9leb3|rbp47_nicpl : 142.0)


Gene families : OG0000531 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000531_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20979

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00161920 ATRBP45A,... Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G54900 ATRBP45A, RBP45A RNA-binding protein 45A 0.05 OrthoFinder output from all 47 species
Smo80061 ATRBP47C', RBP47C' Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia 0.04 OrthoFinder output from all 47 species
Solyc02g080420.4.1 ATRBP45C, Solyc02g080420 mRNA-binding regulatory factor (RBP45/47) 0.03 OrthoFinder output from all 47 species
Solyc10g050860.3.1 ATRBP47B,... mRNA-binding regulatory factor (RBP45/47) 0.04 OrthoFinder output from all 47 species
Spa_g51224 ATRBP47B, RBP47B regulatory factor *(RBP45/47) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 33 97
No external refs found!