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Gb_20939 (TIC55-II)


Aliases : TIC55-II

Description : component Tic55 of inner envelope TIC translocation system


Gene families : OG0007674 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007674_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20939
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00118960 TIC55-II,... Protein translocation.chloroplast.inner envelope TIC... 0.05 OrthoFinder output from all 47 species
AT2G24820 TIC55-II translocon at the inner envelope membrane of chloroplasts 55-II 0.04 OrthoFinder output from all 47 species
Aev_g48661 TIC55-II component *(Tic55) of inner envelope TIC translocation... 0.04 OrthoFinder output from all 47 species
Aob_g01941 TIC55-II component *(Tic55) of inner envelope TIC translocation... 0.06 OrthoFinder output from all 47 species
Aop_g17685 TIC55-II component *(Tic55) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Cba_g19533 TIC55-II component *(Tic55) of inner envelope TIC translocation... 0.04 OrthoFinder output from all 47 species
Dac_g16558 TIC55-II component *(Tic55) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
LOC_Os02g54980.1 TIC55-II, LOC_Os02g54980 component Tic55 of inner envelope TIC translocation system 0.05 OrthoFinder output from all 47 species
Len_g15207 TIC55-II component *(Tic55) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Mp8g17030.1 TIC55-II component Tic55 of inner envelope TIC translocation system 0.03 OrthoFinder output from all 47 species
Solyc12g096550.2.1 TIC55-II, Solyc12g096550 component Tic55 of inner envelope TIC translocation system 0.03 OrthoFinder output from all 47 species
Tin_g14772 TIC55-II component *(Tic55) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Zm00001e016099_P001 TIC55-II, Zm00001e016099 component Tic55 of inner envelope TIC translocation system 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEA Interproscan
MF GO:0051537 2 iron, 2 sulfur cluster binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR017941 Rieske_2Fe-2S 95 177
IPR013626 PaO 300 384
No external refs found!