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  5. AMTR_s00055p00196140

AMTR_s00055p00196140 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00055.133

Description : Putative DUF21 domain-containing protein At3g13070, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0004461 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004461_tree ,
OG_02_0004360 (LandPlants) Phylogenetic Tree(s): OG_02_0004360_tree ,
OG_03_0005420 (SeedPlants) Phylogenetic Tree(s): OG_03_0005420_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00055p00196140
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AT3G13070 No alias CBS domain-containing protein / transporter associated... 0.03 Archaeplastida
GSVIVT01037786001 No alias Putative DUF21 domain-containing protein At3g13070,... 0.03 Archaeplastida
LOC_Os03g39640.2 No alias DUF21 domain-containing protein At1g55930, chloroplastic... 0.02 Archaeplastida
Pp3c10_7850V3.1 No alias CBS domain-containing protein / transporter associated... 0.04 Archaeplastida
Pp3c2_3830V3.1 No alias CBS domain-containing protein / transporter associated... 0.04 Archaeplastida
Smo75780 No alias DUF21 domain-containing protein At1g55930, chloroplastic... 0.03 Archaeplastida
Solyc07g065310.3.1 No alias Putative DUF21 domain-containing protein At3g13070,... 0.05 Archaeplastida
Zm00001e004956_P001 No alias DUF21 domain-containing protein At1g55930, chloroplastic... 0.05 Archaeplastida
AT3G13070 No alias CBS domain-containing protein / transporter associated... 0.02 LandPlants
GSVIVT01037786001 No alias Putative DUF21 domain-containing protein At3g13070,... 0.02 LandPlants
LOC_Os03g39640.2 No alias DUF21 domain-containing protein At1g55930, chloroplastic... 0.02 LandPlants
Mp4g09150.1 No alias DUF21 domain-containing protein At1g55930, chloroplastic... 0.02 LandPlants
Pp3c10_7850V3.1 No alias CBS domain-containing protein / transporter associated... 0.03 LandPlants
Pp3c2_3830V3.1 No alias CBS domain-containing protein / transporter associated... 0.04 LandPlants
Solyc07g065310.3.1 No alias Putative DUF21 domain-containing protein At3g13070,... 0.04 LandPlants
Zm00001e004956_P001 No alias DUF21 domain-containing protein At1g55930, chloroplastic... 0.04 LandPlants
AT3G13070 No alias CBS domain-containing protein / transporter associated... 0.02 SeedPlants
GSVIVT01037786001 No alias Putative DUF21 domain-containing protein At3g13070,... 0.02 SeedPlants
Solyc07g065310.3.1 No alias Putative DUF21 domain-containing protein At3g13070,... 0.05 SeedPlants
Zm00001e004956_P001 No alias DUF21 domain-containing protein At1g55930, chloroplastic... 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000644 CBS_dom 424 478
IPR002550 CNNM 164 342
IPR005170 Transptr-assoc_dom 501 605
No external refs found!