Aliases : AGO7, ZIP
Description : siRNA-binding factor (AGO2) of non-canonical RdDM pathway
Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00265690 | PNH, AGO10, ZLL,... | Chromatin organisation.DNA methylation.canonical... | 0.03 | OrthoFinder output from all 47 species | |
AT5G21030 | No alias | PAZ domain-containing protein / piwi domain-containing protein | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene62001.t1 | AGO3, Aspi01Gene62001 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_123150g0010 | AGO7, ZIP | siRNA-binding factor (AGO2) of non-canonical RdDM pathway | 0.02 | OrthoFinder output from all 47 species | |
MA_159389g0010 | AGO7, ZIP | Protein argonaute 7 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
MA_246308g0010 | AGO9 | Protein argonaute 7 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
MA_85246g0010 | AGO9 | Protein argonaute 4A OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g18269 | AGO6 | siRNA-integrating factor *(AGO) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e010349_P002 | AGO1, Zm00001e010349 | Protein argonaute 18 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e016179_P001 | PNH, AGO10, ZLL,... | Protein argonaute MEL1 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009143 | nucleoside triphosphate catabolic process | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
BP | GO:0046434 | organophosphate catabolic process | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
MF | GO:0047429 | nucleoside triphosphate diphosphatase activity | IEP | HCCA |
BP | GO:1901292 | nucleoside phosphate catabolic process | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
No external refs found! |