Gb_20519


Description : no description available(sp|c0hla0|gh5fp_chaob : 178.0)


Gene families : OG0002519 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002519_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20519
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
Ala_g04661 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g20980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g33174 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06574 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g64697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0349.g066500 No alias not classified & original description: CDS=1-1677 0.04 OrthoFinder output from all 47 species
Cba_g29523 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G063600.1 Ceric.21G063600 not classified & original description: pacid=50603932... 0.04 OrthoFinder output from all 47 species
Dac_g14755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47060 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
GSVIVT01019433001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01019434001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01019436001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_13276 No alias no description available(sp|c0hla0|gh5fp_chaob : 569.0) 0.04 OrthoFinder output from all 47 species
Gb_20405 No alias no description available(sp|c0hla0|gh5fp_chaob : 373.0) 0.04 OrthoFinder output from all 47 species
LOC_Os02g38260.1 LOC_Os02g38260 no description available(sp|c0hla0|gh5fp_chaob : 355.0) 0.03 OrthoFinder output from all 47 species
LOC_Os04g40510.1 LOC_Os04g40510 no description available(sp|c0hla0|gh5fp_chaob : 345.0) 0.01 OrthoFinder output from all 47 species
Len_g14860 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g15893 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g15991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10432675g0010 No alias no description available(sp|c0hla0|gh5fp_chaob : 232.0) 0.04 OrthoFinder output from all 47 species
MA_4391326g0010 No alias no description available(sp|c0hla0|gh5fp_chaob : 81.3) 0.05 OrthoFinder output from all 47 species
Mp1g20450.1 No alias no description available(sp|c0hla0|gh5fp_chaob : 417.0) 0.02 OrthoFinder output from all 47 species
Msp_g31479 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g10993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022182 No alias not classified & original description: CDS=1-1254 0.03 OrthoFinder output from all 47 species
Solyc05g013810.4.1 Solyc05g013810 no description available(sp|c0hla0|gh5fp_chaob : 86.3) 0.03 OrthoFinder output from all 47 species
Solyc08g081720.4.1 Solyc08g081720 no description available(sp|c0hla0|gh5fp_chaob : 383.0) 0.04 OrthoFinder output from all 47 species
Spa_g31249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09265 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e022886_P001 Zm00001e022886 no description available(sp|c0hla0|gh5fp_chaob : 334.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP HCCA
BP GO:0009245 lipid A biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0019213 deacetylase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046493 lipid A metabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901269 lipooligosaccharide metabolic process IEP HCCA
BP GO:1901271 lipooligosaccharide biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!