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  5. Gb_20405

Gb_20405


Description : no description available(sp|c0hla0|gh5fp_chaob : 373.0)


Gene families : OG0002519 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002519_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20405
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Ala_g04661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20980 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g29523 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.21G063600.1 Ceric.21G063600 not classified & original description: pacid=50603932... 0.03 OrthoFinder output from all 47 species
Dde_g47060 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01014357001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01019434001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01019436001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_13276 No alias no description available(sp|c0hla0|gh5fp_chaob : 569.0) 0.08 OrthoFinder output from all 47 species
Gb_20519 No alias no description available(sp|c0hla0|gh5fp_chaob : 178.0) 0.04 OrthoFinder output from all 47 species
Gb_32318 No alias no description available(sp|c0hla0|gh5fp_chaob : 470.0) 0.03 OrthoFinder output from all 47 species
LOC_Os02g38260.1 LOC_Os02g38260 no description available(sp|c0hla0|gh5fp_chaob : 355.0) 0.03 OrthoFinder output from all 47 species
LOC_Os08g39360.1 LOC_Os08g39360 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g20450.1 No alias no description available(sp|c0hla0|gh5fp_chaob : 417.0) 0.03 OrthoFinder output from all 47 species
Mp8g14230.1 No alias no description available(sp|c0hla0|gh5fp_chaob : 331.0) 0.02 OrthoFinder output from all 47 species
Nbi_g10993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g31249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007796_P001 Zm00001e007796 no description available(sp|c0hla0|gh5fp_chaob : 285.0) 0.03 OrthoFinder output from all 47 species
Zm00001e022886_P001 Zm00001e022886 no description available(sp|c0hla0|gh5fp_chaob : 334.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 11 298
No external refs found!