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  5. Gb_20144

Gb_20144 (HCA2, DOF5.6)


Aliases : HCA2, DOF5.6

Description : transcription factor (DOF)


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20144

Target Alias Description ECC score Gene Family Method Actions
AT1G64620 No alias Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT3G55370 OBP3 OBF-binding protein 3 0.03 OrthoFinder output from all 47 species
AT5G60200 TMO6 TARGET OF MONOPTEROS 6 0.03 OrthoFinder output from all 47 species
AT5G60850 OBP4 OBF binding protein 4 0.01 OrthoFinder output from all 47 species
Adi_g007394 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g024682 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081944 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113482 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113667 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01888 CDF3 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g47633 CDF3 transcription factor *(DOF) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g09379 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09611 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36307 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67430 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66325.t1 OBP3, Aspi01Gene66325 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0166.g054389 TMO6 transcription factor *(DOF) & original description: CDS=1-1341 0.01 OrthoFinder output from all 47 species
Azfi_s0176.g056104 No alias transcription factor *(DOF) & original description: CDS=1-1632 0.02 OrthoFinder output from all 47 species
Azfi_s0197.g057380 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=242-1003 0.03 OrthoFinder output from all 47 species
Cba_g11407 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34327 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g76223 No alias transcription factor *(DOF) & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g12302 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13892 OBP1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18747 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005057001 TMO6 RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
GSVIVT01007992001 CDF1 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01016538001 OBP3 RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
GSVIVT01016887001 ADOF1, DOF1 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01021086001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01029943001 CDF3 RNA biosynthesis.transcriptional activation.C2C2... 0.01 OrthoFinder output from all 47 species
LOC_Os01g64590.1 LOC_Os01g64590 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os02g47810.1 HCA2, DOF5.6,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os03g16850.1 OBP3, LOC_Os03g16850 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os03g55610.1 ADOF2, DOF2,... transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os04g47990.1 LOC_Os04g47990 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os04g58190.1 LOC_Os04g58190 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os05g02150.1 OBP3, LOC_Os05g02150 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os06g17410.1 ADOF2, DOF2,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os07g13260.1 OBP3, LOC_Os07g13260 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os12g38200.1 LOC_Os12g38200 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
MA_459791g0010 TMO6 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
MA_74014g0010 No alias transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Mp1g18540.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g31889 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45088 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18526 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28297 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g52876 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19399 CDF2 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19752 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53347 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g078620.1.1 ADOF2, DOF2,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc03g121400.1.1 ADOF2, DOF2,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc04g070960.3.1 Solyc04g070960 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc06g076030.3.1 Solyc06g076030 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc09g010680.3.1 Solyc09g010680 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc10g086440.2.1 DOF2.4,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Spa_g54524 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000526_P001 CDF3, Zm00001e000526 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e002951_P002 Zm00001e002951 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e007228_P002 Zm00001e007228 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e010454_P001 TMO6, Zm00001e010454 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e015414_P004 Zm00001e015414 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e015597_P001 HCA2, DOF5.6,... transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Zm00001e018163_P001 Zm00001e018163 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e023218_P004 Zm00001e023218 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e027411_P001 Zm00001e027411 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e027634_P002 OBP3, Zm00001e027634 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e034454_P001 ADOF1, DOF1,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e035074_P001 TMO6, Zm00001e035074 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e041444_P001 Zm00001e041444 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 50 105
No external refs found!