Aliases : RPL2.1
Description : component psRPS11 of small ribosomal subunit proteome
Gene families : OG0002194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002194_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
ATCG00830 | RPL2.1 | ribosomal protein L2 | 0.05 | OrthoFinder output from all 47 species | |
ATCG01310 | RPL2.2 | ribosomal protein L2 | 0.05 | OrthoFinder output from all 47 species | |
Aev_g14432 | RPL2.1 | component *(uL2c) of large plastid ribosomal-subunit... | 0.12 | OrthoFinder output from all 47 species | |
Aev_g24286 | No alias | component *(uL2m) of large mitoribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
Ala_g18429 | RPL2.1 | component *(uL2c) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
Ala_g38158 | No alias | component *(uL2m) of large mitoribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Als_g02244 | RPL2.1 | component *(uL2c) of large plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
Als_g02447 | No alias | component *(uL2m) of large mitoribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Aob_g13898 | RPL2.1 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Cba_g03784 | No alias | component *(uL2m) of large mitoribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Cba_g04596 | RPL2.1 | component *(uL2c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.05G042700.1 | RPL2.1, Ceric.05G042700 | not classified & original description: pacid=50577724... | 0.13 | OrthoFinder output from all 47 species | |
Ceric.05G048500.1 | RPL2.1, Ceric.05G048500 | component *(uL2c) of large plastid ribosomal-subunit... | 0.1 | OrthoFinder output from all 47 species | |
Ceric.07G017400.1 | RPL2.1, Ceric.07G017400 | not classified & original description: pacid=50626616... | 0.09 | OrthoFinder output from all 47 species | |
Ceric.09G020100.1 | RPL2.1, Ceric.09G020100 | not classified & original description: pacid=50586708... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.1Z020200.1 | RPL2.1, Ceric.1Z020200 | not classified & original description: pacid=50586367... | 0.08 | OrthoFinder output from all 47 species | |
Ceric.1Z164200.1 | RPL2.1, Ceric.1Z164200 | not classified & original description: pacid=50596959... | 0.11 | OrthoFinder output from all 47 species | |
Ceric.25G023800.1 | Ceric.25G023800 | not classified & original description: pacid=50593099... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.38G009500.1 | RPL2.1, Ceric.38G009500 | not classified & original description: pacid=50580350... | 0.11 | OrthoFinder output from all 47 species | |
Ceric.38G057600.1 | Ceric.38G057600 | not classified & original description: pacid=50579815... | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g49833 | RPL2.1 | component *(uL2c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01023979001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g13189 | RPL2.1 | component *(uL2c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
MA_7814449g0010 | No alias | 60S ribosomal protein L2, mitochondrial OS=Oryza sativa... | 0.04 | OrthoFinder output from all 47 species | |
Mp1g19370.1 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g04996 | RPL2.1 | component *(uL2c) of large plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
Nbi_g39693 | No alias | component *(uL2m) of large mitoribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
Ore_g43250 | RPL2.1 | component *(uL2c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g37334 | No alias | component *(uL2m) of large mitoribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
Solyc00g500035.1.1 | RPL2.1, Solyc00g500035 | 50S ribosomal protein L2, chloroplastic OS=Nicotiana... | 0.07 | OrthoFinder output from all 47 species | |
Solyc00g500036.1.1 | RPL2.1, Solyc00g500036 | 50S ribosomal protein L2, chloroplastic OS=Nicotiana... | 0.06 | OrthoFinder output from all 47 species | |
Solyc00g500047.1.1 | RPL2.1, Solyc00g500047 | 50S ribosomal protein L2, chloroplastic OS=Solanum... | 0.04 | OrthoFinder output from all 47 species | |
Solyc00g500079.1.1 | RPL2.1, Solyc00g500079 | 50S ribosomal protein L2, chloroplastic OS=Nicotiana... | 0.07 | OrthoFinder output from all 47 species | |
Solyc00g500080.1.1 | RPL2.1, Solyc00g500080 | 50S ribosomal protein L2, chloroplastic OS=Nicotiana... | 0.06 | OrthoFinder output from all 47 species | |
Solyc00g500152.1.1 | RPL2.1, Solyc00g500152 | 50S ribosomal protein L2, chloroplastic OS=Nicotiana... | 0.05 | OrthoFinder output from all 47 species | |
Solyc00g500297.1.1 | RPL2.1, Solyc00g500297 | 50S ribosomal protein L2, chloroplastic OS=Nicotiana... | 0.07 | OrthoFinder output from all 47 species | |
Solyc00g500298.1.1 | RPL2.1, Solyc00g500298 | 50S ribosomal protein L2, chloroplastic OS=Nicotiana... | 0.06 | OrthoFinder output from all 47 species | |
Solyc02g150102.1.1 | RPL2.1, Solyc02g150102 | 50S ribosomal protein L2, chloroplastic OS=Aethionema... | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
CC | GO:0009521 | photosystem | IEP | HCCA |
CC | GO:0009522 | photosystem I | IEP | HCCA |
CC | GO:0009579 | thylakoid | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
No external refs found! |