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  5. Gb_19964

Gb_19964 (RD21, RD21A)


Aliases : RD21, RD21A

Description : Prgrammed Cell Death cysteine protease (XCP)


Gene families : OG0000056 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_19964
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AT1G47128 RD21, RD21A Granulin repeat cysteine protease family protein 0.03 OrthoFinder output from all 47 species
Als_g11955 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Cba_g03848 XCP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.06 OrthoFinder output from all 47 species
Cba_g32548 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Dde_g21267 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01022063001 RD21, RD21A Cysteine proteinase RD21A OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Len_g28846 XCP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Nbi_g13765 XCP2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ore_g38388 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Sam_g09857 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Spa_g17037 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Spa_g51305 XCP2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0006914 autophagy IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
InterPro domains Description Start Stop
IPR013201 Prot_inhib_I29 44 100
IPR000118 Granulin 380 427
IPR000668 Peptidase_C1A_C 133 346
No external refs found!