Gb_19950 (NEF1)


Aliases : NEF1

Description : exine patterning factor (NEF1)


Gene families : OG0004275 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004275_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_19950

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00233120 NEF1,... Cell wall.sporopollenin.exine wall formation.NEF1 exine... 0.04 OrthoFinder output from all 47 species
Ala_g06738 NEF1 exine patterning factor *(NEF1) & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g01840 NEF1 exine patterning factor *(NEF1) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37910 NEF1 exine patterning factor *(NEF1) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z076600.1 NEF1, Ceric.1Z076600 exine patterning factor *(NEF1) & original description:... 0.07 OrthoFinder output from all 47 species
Cre01.g018050 NEF1 Cell wall.sporopollenin.exine wall formation.NEF1 exine... 0.07 OrthoFinder output from all 47 species
Dcu_g04975 NEF1 exine patterning factor *(NEF1) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g04037 NEF1 exine patterning factor *(NEF1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001111001 NEF1 Cell wall.sporopollenin.exine wall formation.NEF1 exine... 0.03 OrthoFinder output from all 47 species
LOC_Os11g32470.1 NEF1, LOC_Os11g32470 exine patterning factor (NEF1) 0.06 OrthoFinder output from all 47 species
Len_g16443 NEF1 exine patterning factor *(NEF1) & original description: none 0.02 OrthoFinder output from all 47 species
MA_302207g0010 NEF1 exine patterning factor (NEF1) 0.09 OrthoFinder output from all 47 species
Msp_g03573 NEF1 exine patterning factor *(NEF1) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03839 NEF1 exine patterning factor *(NEF1) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10459 NEF1 exine patterning factor *(NEF1) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014202 NEF1 exine patterning factor *(NEF1) & original description:... 0.02 OrthoFinder output from all 47 species
Sam_g13515 No alias exine patterning factor *(NEF1) & original description: none 0.02 OrthoFinder output from all 47 species
Smo92814 NEF1 Cell wall.sporopollenin.exine wall formation.NEF1 exine... 0.02 OrthoFinder output from all 47 species
Solyc11g033282.1.1 NEF1, Solyc11g033282 exine patterning factor (NEF1) 0.08 OrthoFinder output from all 47 species
Spa_g15321 NEF1 exine patterning factor *(NEF1) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!