Description : RING-HC-class E3 ligase
Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G74990 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
Adi_g017353 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g05095 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g59221 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Solyc01g109340.4.1 | Solyc01g109340 | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g063200.3.1 | RMA3, ATRMA3,... | RING-HC-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
Spa_g11747 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e041298_P002 | RMA1, ATRMA1,... | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0046872 | metal ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | HCCA |
BP | GO:0015858 | nucleoside transport | IEP | HCCA |
BP | GO:0015931 | nucleobase-containing compound transport | IEP | HCCA |
MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
BP | GO:1901264 | carbohydrate derivative transport | IEP | HCCA |
MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | HCCA |
BP | GO:1901642 | nucleoside transmembrane transport | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR018957 | Znf_C3HC4_RING-type | 29 | 69 |
No external refs found! |