LOC_Os02g49950 (Os02g0732200)


Aliases : Os02g0732200

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ARM repeat superfamily protein


Gene families : OG_01_0001127 (Gene family) Phylogenetic Tree(s): OG0001127_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os02g49950
Cluster HCCA cluster: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AT1G23030 No alias ARM repeat superfamily protein 0.03 Gene family
AT1G71020 No alias ARM repeat superfamily protein 0.07 Gene family
LOC_Os06g01304 Os06g0102700,... 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Smo84320 PACid_15416267 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Solyc04g007640.3.1 Solyc04g007640.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ARM... 0.05 Gene family
Solyc11g008390.2.1 Solyc11g008390.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d000381 GRMZM2G471733 29.5.11 protein.degradation.ubiquitin ARM repeat... 0.06 Gene family
Zm00001d030732 GRMZM2G092652 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan
BP GO:0016567 protein ubiquitination IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000225 Armadillo 386 424
IPR000225 Armadillo 469 507
IPR003613 Ubox_domain 262 332
No external refs found!