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  5. Gb_18995

Gb_18995 (MSH7, ATMSH7, MSH6-2)


Aliases : MSH7, ATMSH7, MSH6-2

Description : DNA mismatch repair protein MSH7 OS=Arabidopsis thaliana (sp|q9smv7|msh7_arath : 455.0)


Gene families : OG0001663 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001663_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_18995

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00242090 MSH7, ATMSH7,... DNA mismatch repair protein MSH7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G24495 MSH7, ATMSH7, MSH6-2 MUTS homolog 7 0.03 OrthoFinder output from all 47 species
Als_g23299 MSH7, ATMSH7, MSH6-2 component *(MSH7) of MSH2-x mismatch repair heterodimers... 0.02 OrthoFinder output from all 47 species
Azfi_s0015.g014037 MSH7, ATMSH7, MSH6-2 component *(MSH7) of MSH2-x mismatch repair heterodimers... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000489.16 MSH6-1, ATMSH6, MSH6 DNA mismatch repair protein MSH6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre05.g235750 MSH6-1, ATMSH6, MSH6 DNA mismatch repair protein MSH6 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Dac_g23796 MSH7, ATMSH7, MSH6-2 component *(MSH7) of MSH2-x mismatch repair heterodimers... 0.02 OrthoFinder output from all 47 species
GSVIVT01015407001 MSH7, ATMSH7, MSH6-2 DNA damage response.DNA repair mechanisms.mismatch... 0.03 OrthoFinder output from all 47 species
LOC_Os01g08540.1 MSH7, ATMSH7,... component MSH7 of MSH2-x mismatch repair heterodimers 0.04 OrthoFinder output from all 47 species
LOC_Os09g24220.1 MSH6-1, ATMSH6,... component MSH6 of MSH2-x mismatch repair heterodimers 0.04 OrthoFinder output from all 47 species
MA_10435491g0030 MSH6-1, ATMSH6, MSH6 DNA mismatch repair protein MSH6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_214705g0010 MSH7, ATMSH7, MSH6-2 DNA mismatch repair protein MSH7 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp2g14640.1 MSH6-1, ATMSH6, MSH6 component MSH6 of MSH2-x mismatch repair heterodimers 0.03 OrthoFinder output from all 47 species
Mp7g16850.1 MSH7, ATMSH7, MSH6-2 component MSH7 of MSH2-x mismatch repair heterodimers 0.07 OrthoFinder output from all 47 species
Sam_g16226 No alias component *(MSH7) of MSH2-x mismatch repair heterodimers... 0.02 OrthoFinder output from all 47 species
Solyc01g079520.3.1 MSH6-1, ATMSH6,... component MSH6 of MSH2-x mismatch repair heterodimers 0.02 OrthoFinder output from all 47 species
Zm00001e016678_P004 MSH7, ATMSH7,... component MSH7 of MSH2-x mismatch repair heterodimers 0.04 OrthoFinder output from all 47 species
Zm00001e034087_P001 MSH6-1, ATMSH6,... component MSH6 of MSH2-x mismatch repair heterodimers 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006298 mismatch repair IEA Interproscan
MF GO:0030983 mismatched DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005664 nuclear origin of replication recognition complex IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR007696 DNA_mismatch_repair_MutS_core 2 152
IPR000432 DNA_mismatch_repair_MutS_C 223 442
No external refs found!