1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_18954

Gb_18954


Description : no description available(sp|a0a222nnm9|cos1_cocnu : 172.0)


Gene families : OG0000481 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000481_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_18954
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00027690 evm_27.TU.AmTr_v1... 11S globulin seed storage protein 2 OS=Sesamum indicum 0.04 OrthoFinder output from all 47 species
AT1G03880 CRU2, CRB cruciferin 2 0.04 OrthoFinder output from all 47 species
AT1G03890 No alias RmlC-like cupins superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G28520 CRU3, CRC cruciferin 3 0.03 OrthoFinder output from all 47 species
AT5G44120 CRU1, CRA1, ATCRA1 RmlC-like cupins superfamily protein 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011190 No alias Globulin-type seed storage protein *(CR) & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0007.g011191 CRU2, CRB Globulin-type seed storage protein *(CR) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0010.g012318 No alias Globulin-type seed storage protein & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0045.g029739 CRU3, CRC Globulin-type seed storage protein *(CR) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0104.g044758 No alias Globulin-type seed storage protein *(CR) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0152.g053400 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0152.g053408 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z155300.1 Ceric.1Z155300 Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01022916001 No alias Glutelin type-A 3 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
GSVIVT01028337001 CRU1, CRA1, ATCRA1 11S globulin subunit beta OS=Cucurbita maxima 0.03 OrthoFinder output from all 47 species
GSVIVT01028338001 CRU3, CRC 11S globulin subunit beta OS=Cucurbita maxima 0.03 OrthoFinder output from all 47 species
GSVIVT01028341001 CRU3, CRC 11S globulin subunit beta OS=Cucurbita maxima 0.03 OrthoFinder output from all 47 species
LOC_Os08g03410.1 CRU1, CRA1,... no description available(sp|a0a222nnm9|cos1_cocnu : 326.0) 0.03 OrthoFinder output from all 47 species
LOC_Os09g37976.1 LOC_Os09g37976 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g07654 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Len_g37579 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Ore_g04135 CRU3, CRC not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43224 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Pir_g15974 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g25952 No alias Globulin-type seed storage protein *(CR) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g27212 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo87987 No alias Legumin B OS=Gossypium hirsutum 0.03 OrthoFinder output from all 47 species
Solyc01g094110.3.1 Solyc01g094110 13S globulin seed storage protein 2 OS=Fagopyrum... 0.05 OrthoFinder output from all 47 species
Solyc03g005580.2.1 CRU1, CRA1,... no description available(sp|a0a1l6k371|jugn4_jugni : 439.0) 0.03 OrthoFinder output from all 47 species
Solyc09g025210.3.1 CRU1, CRA1,... no description available(sp|q2tpw5|jugr4_jugre : 424.0) 0.04 OrthoFinder output from all 47 species
Solyc09g072560.4.1 CRU1, CRA1,... 11S globulin seed storage protein 2 OS=Sesamum indicum... 0.04 OrthoFinder output from all 47 species
Solyc09g090150.4.1 CRU2, CRB, Solyc09g090150 no description available(sp|a0a1l6k371|jugn4_jugni : 418.0) 0.04 OrthoFinder output from all 47 species
Spa_g43375 No alias Globulin-type seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027621_P002 Zm00001e027621 Glutelin type-D 1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR006045 Cupin_1 64 205
No external refs found!