1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_18693

Gb_18693 (OPCL1)


Aliases : OPCL1

Description : OPC-8:CoA synthetase


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_18693

Target Alias Description ECC score Gene Family Method Actions
Ala_g04413 OPCL1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g11897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26811 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17436 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27234 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34196.t1 OPCL1, Aspi01Gene34196 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45697.t1 OPCL1, Aspi01Gene45697 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0258.g060636 No alias not classified & original description: CDS=1-1698 0.04 OrthoFinder output from all 47 species
Azfi_s1020.g095355 No alias not classified & original description: CDS=69-1760 0.01 OrthoFinder output from all 47 species
Ceric.11G077600.1 Ceric.11G077600 not classified & original description: pacid=50595629... 0.03 OrthoFinder output from all 47 species
Ceric.18G029500.1 OPCL1, Ceric.18G029500 not classified & original description: pacid=50621164... 0.01 OrthoFinder output from all 47 species
Ceric.18G030000.1 Ceric.18G030000 not classified & original description: pacid=50622017... 0.04 OrthoFinder output from all 47 species
Dac_g12985 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01385 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10907 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g17286 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011541001 No alias 4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
LOC_Os01g67540.1 LOC_Os01g67540 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp.... 0.01 OrthoFinder output from all 47 species
Len_g38035 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01742 OPCL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g08577 OPCL1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g09089 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15634 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25646 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39436 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g09388 OPCL1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g43738 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04839 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23419 OPCL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g00701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07522 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g42518 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g16099 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g42148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12256 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10312 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g21949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56806 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g56807 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015443 No alias not classified & original description: CDS=406-2094 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0210.g025886 OPCL1 not classified & original description: CDS=370-2175 0.01 OrthoFinder output from all 47 species
Smo268211 OPCL1 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo85691 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc08g076300.3.1 Solyc08g076300 4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g11322 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46255 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 453 528
IPR000873 AMP-dep_Synth/Lig_com 46 444
No external refs found!