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  5. Gb_18621

Gb_18621 (LACS4)


Aliases : LACS4

Description : Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana (sp|q9t0a0|lacs4_arath : 856.0) & Enzyme classification.EC_6 ligases.EC_6.2 ligase forming carbon-sulfur bond(50.6.2 : 453.1)


Gene families : OG0000612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000612_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_18621

Target Alias Description ECC score Gene Family Method Actions
AT1G49430 LRD2, LACS2 long-chain acyl-CoA synthetase 2 0.05 OrthoFinder output from all 47 species
AT2G47240 CER8, LACS1 AMP-dependent synthetase and ligase family protein 0.04 OrthoFinder output from all 47 species
Ceric.24G023000.1 LACS4, Ceric.24G023000 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Dcu_g08877 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01028155001 CER8, LACS1 Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_09959 LACS4 Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os11g35400.1 LRD2, LACS2,... Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g16036 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
MA_10432761g0010 LACS4 Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_839621g0010 No alias Long chain acyl-CoA synthetase 5 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Msp_g09778 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Msp_g11320 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Sam_g16833 No alias EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Solyc01g079240.3.1 CER8, LACS1,... Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc01g109180.4.1 LRD2, LACS2,... Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc09g075770.3.1 LACS6, ATLACS6,... peroxisomal long-chain acyl-CoA synthetase 0.03 OrthoFinder output from all 47 species
Spa_g26451 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Spa_g40891 LACS6, ATLACS6 EC_6.2 ligase forming carbon-sulfur bond & original... 0.12 OrthoFinder output from all 47 species
Zm00001e024608_P001 LRD2, LACS2,... Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e040332_P001 CER8, LACS1,... Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 55 525
No external refs found!