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  5. Gb_18516

Gb_18516


Description : Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana (sp|q6aww5|y5262_arath : 87.4)


Gene families : OG0000490 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000490_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_18516

Target Alias Description ECC score Gene Family Method Actions
Aop_g04260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10623 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g11227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16535.t1 Aspi01Gene16535 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70952.t1 Aspi01Gene70952 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g41164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_30856 No alias Ankyrin repeat-containing protein At5g02620... 0.04 OrthoFinder output from all 47 species
Gb_30943 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g16272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g05225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g05359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08854 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24157 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g41351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 277 299
IPR011646 KAP_P-loop 505 909
IPR020683 DUF3447 184 264
IPR020683 DUF3447 15 112
IPR020683 DUF3447 308 379
No external refs found!