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  5. Gb_18259

Gb_18259


Description : 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis thaliana (sp|q0wrj2|tc10a_arath : 124.0)


Gene families : OG0000323 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000323_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_18259
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
Adi_g082554 HSD1, ATHSD1 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Aev_g02981 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Aev_g13345 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Ala_g25817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28405 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Als_g03614 HSD4, AtHSD4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18028 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Als_g20604 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Aob_g03036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01710 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g07316 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10811 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16763 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g20206 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Aop_g20431 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.05 OrthoFinder output from all 47 species
Aop_g21861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08244.t1 Aspi01Gene08244 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene18946.t1 Aspi01Gene18946 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene25283.t1 Aspi01Gene25283 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene25287.t1 Aspi01Gene25287 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene25288.t1 Aspi01Gene25288 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene53708.t1 Aspi01Gene53708 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene58179.t1 Aspi01Gene58179 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene58180.t1 Aspi01Gene58180 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene69504.t1 Aspi01Gene69504 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Azfi_s0187.g056732 No alias not classified & original description: CDS=345-1343 0.04 OrthoFinder output from all 47 species
Cba_g10274 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Ceric.03G074100.1 Ceric.03G074100 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Ceric.03G092800.1 Ceric.03G092800 not classified & original description: pacid=50572487... 0.03 OrthoFinder output from all 47 species
Ceric.10G024300.1 Ceric.10G024300 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Ceric.13G034800.1 Ceric.13G034800 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Dac_g11424 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01080 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.06 OrthoFinder output from all 47 species
Dcu_g09776 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g12120 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.07 OrthoFinder output from all 47 species
Dcu_g17743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06710 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Dde_g25756 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.06 OrthoFinder output from all 47 species
Ehy_g00857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02425 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Ehy_g03383 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Ehy_g14251 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_10045 HSD4, AtHSD4 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_16076 No alias ketosphinganine reductase 0.1 OrthoFinder output from all 47 species
Gb_18262 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_36213 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Gb_36220 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
LOC_Os02g47350.1 LOC_Os02g47350 ketosphinganine reductase 0.06 OrthoFinder output from all 47 species
Len_g13232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17282 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Len_g22246 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Len_g23542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10216834g0010 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10429850g0010 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_10431393g0010 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_115565g0010 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_115712g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_18262g0020 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_18495g0010 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_29607g0010 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_494509g0010 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species
MA_6722018g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_681548g0010 HSD1, ATHSD1 3-dehydrosphinganine reductase TSC10B OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_776612g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_9332825g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp8g15520.1 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g05610 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Nbi_g02896 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Nbi_g18561 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Ore_g24573 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Ore_g26408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06808 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Pnu_g22616 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Ppi_g00767 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Ppi_g04371 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Ppi_g32644 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013206 No alias not classified & original description: CDS=130-408 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0141.g022772 No alias not classified & original description: CDS=245-1243 0.04 OrthoFinder output from all 47 species
Sam_g13230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28867 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Spa_g29325 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g48360 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 37 230
No external refs found!