Description : RNA editing factor (SEL1/PDM1)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G09410 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.04 | OrthoFinder output from all 47 species | |
AT2G37320 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT3G05240 | MEF19 | mitochondrial editing factor 19 | 0.04 | OrthoFinder output from all 47 species | |
AT3G13880 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT4G37170 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
AT5G40410 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
Adi_g004372 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g25067 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g02288 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g30013 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01008407001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01009976001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01011735001 | No alias | Pentatricopeptide repeat-containing protein At2g01510,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01015087001 | CRR2 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01015468001 | No alias | Pentatricopeptide repeat-containing protein At1g31430... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01017378001 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01018098001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01018922001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01021774001 | No alias | Pentatricopeptide repeat-containing protein At4g20770... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01027839001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01033004001 | No alias | Pentatricopeptide repeat-containing protein At3g26782,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01035618001 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01036010001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01037332001 | CRR22 | Pentatricopeptide repeat-containing protein At1g20230... | 0.04 | OrthoFinder output from all 47 species | |
MA_10428421g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
MA_376862g0010 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_472579g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
MA_66417g0010 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.05 | OrthoFinder output from all 47 species | |
MA_7379g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
MA_835083g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | OrthoFinder output from all 47 species | |
MA_83898g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | OrthoFinder output from all 47 species | |
Ppi_g06693 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g57858 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e023289_P001 | Zm00001e023289 | Pentatricopeptide repeat-containing protein At1g31920... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
No external refs found! |