1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_17837

Gb_17837 (HSD1, ATHSD1)


Aliases : HSD1, ATHSD1

Description : 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis thaliana (sp|q0wrj2|tc10a_arath : 143.0)


Gene families : OG0000323 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000323_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_17837

Target Alias Description ECC score Gene Family Method Actions
Adi_g088148 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Ala_g31880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13886 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Ceric.03G092800.1 Ceric.03G092800 not classified & original description: pacid=50572487... 0.04 OrthoFinder output from all 47 species
Dcu_g12121 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.05 OrthoFinder output from all 47 species
Ehy_g14251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g47350.1 LOC_Os02g47350 ketosphinganine reductase 0.02 OrthoFinder output from all 47 species
Mp8g15520.1 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g07597 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Nbi_g18192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08300 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32644 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Sam_g39139 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 42 237
No external refs found!