Gb_17277 (ATRDRP1, RDR1)

Aliases : ATRDRP1, RDR1

Description : Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica (sp|q0dxs3|rdr1_orysj : 219.0)

Gene families : OG0001039 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001039_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_17277

Target	Alias	Description	ECC score	Gene Family Method
Aop_g01841	ATRDRP1, RDR1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g14066	ATRDRP1, RDR1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10435839g0010	ATRDRP1, RDR1	RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_10436625g0010	ATRDRP1, RDR1	RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Pnu_g10447	SDE1, RDR6, SGS2	ssRNA polymerase *(RDR6) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g15965	ATRDRP1, RDR1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g16856	ATRDRP1, RDR1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g14128	ATRDRP1, RDR1	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003968	RNA-dependent RNA polymerase activity	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
MF	GO:0034062	5'-3' RNA polymerase activity	None	Extended
MF	GO:0097747	RNA polymerase activity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0004527	exonuclease activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008408	3'-5' exonuclease activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007855	RNA-dep_RNA_pol_euk-typ	3	63

External Links

No external refs found!