Gb_17136


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 174.0)


Gene families : OG0000012 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_17136

Target Alias Description ECC score Gene Family Method Actions
Aev_g13537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17123 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20631 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g22024 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g22408 ORF240B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23285 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g28521 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g28587 ORF170 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g28996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g29454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g30290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33815 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g33924 CRK8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g34208 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g34233 ORF240B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34234 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38201 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44878 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47202 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48030 CRK8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48305 ORF240B not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48775 CRK8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g49154 CRK8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g49293 CRK8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28565 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67688 CRK8 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene17543.t1 CRK8, Aspi01Gene17543 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_00282 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.03 OrthoFinder output from all 47 species
Gb_04521 ORF170 Uncharacterized mitochondrial protein AtMg00820... 0.06 OrthoFinder output from all 47 species
Gb_04681 CRK8 Uncharacterized mitochondrial protein AtMg00820... 0.08 OrthoFinder output from all 47 species
Gb_06017 ORF170 Retrovirus-related Pol polyprotein from transposon RE1... 0.05 OrthoFinder output from all 47 species
Gb_07720 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 OrthoFinder output from all 47 species
Gb_15757 CRK8 Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_19564 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_21082 ORF170 Retrovirus-related Pol polyprotein from transposon RE1... 0.08 OrthoFinder output from all 47 species
Gb_21999 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 OrthoFinder output from all 47 species
Gb_23017 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.07 OrthoFinder output from all 47 species
Gb_26007 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Gb_30484 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Gb_36407 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013103 RVT_2 13 183
No external refs found!