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  5. Gb_17091

Gb_17091 (CRR22)


Aliases : CRR22

Description : RNA editing factor (OTP82)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_17091

Target Alias Description ECC score Gene Family Method Actions
Adi_g003774 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g003784 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02288 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g05949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06485 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34577 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35068 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g36369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_04402 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.06 OrthoFinder output from all 47 species
MA_123466g0010 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_43615g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_472579g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.06 OrthoFinder output from all 47 species
MA_653417g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Msp_g17283 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g04466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05289 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06693 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18881 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43340 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g56225 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57858 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g05074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e034903_P001 SLO1, Zm00001e034903 Pentatricopeptide repeat-containing protein At2g22410,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 603 727
IPR002885 Pentatricopeptide_repeat 127 174
IPR002885 Pentatricopeptide_repeat 228 275
IPR002885 Pentatricopeptide_repeat 329 376
IPR002885 Pentatricopeptide_repeat 430 477
IPR002885 Pentatricopeptide_repeat 203 227
IPR002885 Pentatricopeptide_repeat 505 528
No external refs found!