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  5. Gb_16720

Gb_16720


Description : component RPL18 of LSU proteome component


Gene families : OG0001263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_16720

Target Alias Description ECC score Gene Family Method Actions
AT3G05590 RPL18 ribosomal protein L18 0.03 OrthoFinder output from all 47 species
Aop_g11456 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.38G049200.1 RPL18, Ceric.38G049200 component *(eL18) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000142.18 RPL18 60S ribosomal protein L18 (Fragment) OS=Cicer arietinum 0.03 OrthoFinder output from all 47 species
Cre12.g512600 RPL18 Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder output from all 47 species
GSVIVT01031168001 RPL18 Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Gb_21301 RPL18 component RPL18 of LSU proteome component 0.04 OrthoFinder output from all 47 species
LOC_Os03g22180.1 LOC_Os03g22180 component RPL18 of LSU proteome component 0.05 OrthoFinder output from all 47 species
LOC_Os05g06310.1 LOC_Os05g06310 component RPL18 of LSU proteome component 0.05 OrthoFinder output from all 47 species
LOC_Os07g47780.1 LOC_Os07g47780 component RPL18 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Len_g14018 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Mp1g22500.1 No alias component RPL18 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Pir_g12785 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pir_g36266 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pp3c1_5330V3.1 RPL18, Pp3c1_5330 ribosomal protein L18 0.03 OrthoFinder output from all 47 species
Pp3c2_32510V3.1 RPL18, Pp3c2_32510 ribosomal protein L18 0.01 OrthoFinder output from all 47 species
Pp3c2_34080V3.1 RPL18, Pp3c2_34080 ribosomal protein L18 0.02 OrthoFinder output from all 47 species
Pp3c7_22030V3.1 RPL18, Pp3c7_22030 ribosomal protein L18 0.01 OrthoFinder output from all 47 species
Sam_g11426 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Sam_g11427 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Smo267976 RPL18 Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Solyc01g099900.4.1 RPL18, Solyc01g099900 component RPL18 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Solyc09g075290.3.1 RPL18, Solyc09g075290 component RPL18 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e026750_P001 Zm00001e026750 component RPL18 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Zm00001e031155_P001 Zm00001e031155 component RPL18 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Zm00001e035836_P001 Zm00001e035836 component RPL18 of LSU proteome component 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 126 262
No external refs found!