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Gb_16521


Description : F-box/kelch-repeat protein At5g42350 OS=Arabidopsis thaliana (sp|q9fii2|fk117_arath : 430.0)


Gene families : OG0009835 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009835_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_16521
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g38300.1 LOC_Os09g38300 F-box/kelch-repeat protein At5g42350 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_6738g0020 No alias F-box/kelch-repeat protein At5g42360 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Mp1g29160.1 No alias F-box/kelch-repeat protein At5g42360 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 255 289
IPR006652 Kelch_1 343 398
IPR006652 Kelch_1 539 569
No external refs found!