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  5. Gb_16397

Gb_16397 (ATRPS13A, RPS13, PFL2, RPS13A)


Aliases : ATRPS13A, RPS13, PFL2, RPS13A

Description : component RPS13 of SSU proteome


Gene families : OG0001931 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001931_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_16397

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00029190 ATRPS13A, RPS13,... Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
AMTR_s00109p00088200 ATRPS13A, RPS13,... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
AT3G60770 No alias Ribosomal protein S13/S15 0.06 OrthoFinder output from all 47 species
AT4G00100 ATRPS13A, RPS13,... ribosomal protein S13A 0.06 OrthoFinder output from all 47 species
Ala_g06976 ATRPS13A, RPS13,... component *(uS15) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Als_g38582 ATRPS13A, RPS13,... component *(uS15) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aop_g01920 ATRPS13A, RPS13,... component *(uS15) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Azfi_s0288.g063234 No alias component *(uS15) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ceric.14G028200.1 ATRPS13A, RPS13,... component *(uS15) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Ceric.24G030900.1 ATRPS13A, RPS13,... component *(uS15) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Cre07.g331900 ATRPS13A, RPS13,... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Dac_g03966 ATRPS13A, RPS13,... component *(uS15) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Ehy_g23160 ATRPS13A, RPS13,... component *(uS15) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01018537001 ATRPS13A, RPS13,... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01027637001 ATRPS13A, RPS13,... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Gb_18181 ATRPS13A, RPS13,... component RPS13 of SSU proteome 0.03 OrthoFinder output from all 47 species
Gb_34582 ATRPS13A, RPS13,... component RPS13 of SSU proteome 0.05 OrthoFinder output from all 47 species
LOC_Os08g02400.1 ATRPS13A, RPS13,... component RPS13 of SSU proteome 0.03 OrthoFinder output from all 47 species
LOC_Os08g02410.1 ATRPS13A, RPS13,... component RPS13 of SSU proteome 0.05 OrthoFinder output from all 47 species
Len_g05038 ATRPS13A, RPS13,... component *(uS15) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
MA_141232g0010 ATRPS13A, RPS13,... component RPS13 of SSU proteome 0.06 OrthoFinder output from all 47 species
Mp4g03410.1 ATRPS13A, RPS13,... component RPS13 of SSU proteome 0.03 OrthoFinder output from all 47 species
Msp_g28279 ATRPS13A, RPS13,... component *(uS15) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Nbi_g15982 ATRPS13A, RPS13,... component *(uS15) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ore_g33497 ATRPS13A, RPS13,... component *(uS15) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Pir_g11979 ATRPS13A, RPS13,... component *(uS15) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c16_15220V3.1 ATRPS13A, RPS13,... ribosomal protein S13A 0.02 OrthoFinder output from all 47 species
Pp3c7_26720V3.1 ATRPS13A, RPS13,... ribosomal protein S13A 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006675 ATRPS13A, RPS13,... component *(uS15) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Smo440805 ATRPS13A, RPS13,... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Solyc01g091220.3.1 ATRPS13A, RPS13,... component RPS13 of SSU proteome 0.03 OrthoFinder output from all 47 species
Solyc11g072260.2.1 ATRPS13A, RPS13,... component RPS13 of SSU proteome 0.03 OrthoFinder output from all 47 species
Spa_g01293 ATRPS13A, RPS13,... component *(uS15) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Spa_g03180 ATRPS13A, RPS13,... component *(uS15) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g56598 ATRPS13A, RPS13,... component *(uS15) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Zm00001e021837_P003 ATRPS13A, RPS13,... component RPS13 of SSU proteome 0.02 OrthoFinder output from all 47 species
Zm00001e021839_P001 ATRPS13A, RPS13,... component RPS13 of SSU proteome 0.06 OrthoFinder output from all 47 species
Zm00001e029210_P002 ATRPS13A, RPS13,... component RPS13 of SSU proteome 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!