1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_16125

Gb_16125 (ATAILP1, AILP1)


Aliases : ATAILP1, AILP1

Description : Stem-specific protein TSJT1 OS=Nicotiana tabacum (sp|p24805|tsjt1_tobac : 108.0)


Gene families : OG0000573 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000573_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_16125

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00066790 ATAILP1, AILP1,... Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
AT5G19140 ATAILP1, AILP1 Aluminium induced protein with YGL and LRDR motifs 0.03 OrthoFinder output from all 47 species
Aev_g12030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0127.g048702 No alias not classified & original description: CDS=691-1623 0.03 OrthoFinder output from all 47 species
GSVIVT01002031001 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.02 OrthoFinder output from all 47 species
Gb_00539 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
LOC_Os03g58170.1 LOC_Os03g58170 Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58280.2 LOC_Os04g58280 Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
LOC_Os12g05050.1 ATAILP1, AILP1,... Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
MA_109804g0010 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.05 OrthoFinder output from all 47 species
MA_12061g0010 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Nbi_g37384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12218 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022207 No alias not classified & original description: CDS=1-915 0.02 OrthoFinder output from all 47 species
Sam_g28867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g013700.2.1 Solyc12g013700 Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
Zm00001e005643_P001 Zm00001e005643 Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR024286 DUF3700 2 226
No external refs found!