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  5. Gb_15880

Gb_15880


Description : Probable 2-oxoglutarate-dependent dioxygenase At3g111800 OS=Arabidopsis thaliana (sp|q9srm3|diox6_arath : 247.0) & Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen(50.1.13 : 146.9)


Gene families : OG0000150 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000150_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_15880

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00251700 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.03 OrthoFinder output from all 47 species
Aev_g13554 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Aev_g35016 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Aspi01Gene21257.t1 Aspi01Gene21257 EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Aspi01Gene30044.t1 Aspi01Gene30044 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34396.t1 Aspi01Gene34396 EC_1.14 oxidoreductase acting on paired donor with... 0.04 OrthoFinder output from all 47 species
Azfi_s0108.g045269 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Gb_18191 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_39839 No alias Flavonol synthase/flavanone 3-hydroxylase (Fragment)... 0.06 OrthoFinder output from all 47 species
Len_g10133 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.04 OrthoFinder output from all 47 species
Lfl_g15842 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
MA_10435395g0010 No alias Flavonol synthase/flavanone 3-hydroxylase OS=Citrus... 0.04 OrthoFinder output from all 47 species
MA_144764g0010 No alias Flavonol synthase/flavanone 3-hydroxylase OS=Citrus... 0.04 OrthoFinder output from all 47 species
MA_29957g0010 No alias Probable 2-oxoglutarate-dependent dioxygenase ANS... 0.03 OrthoFinder output from all 47 species
MA_5267g0010 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pir_g38264 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Solyc03g096050.3.1 Solyc03g096050 Probable 2-oxoglutarate-dependent dioxygenase At5g05600... 0.02 OrthoFinder output from all 47 species
Solyc10g076670.3.1 ATJRG21, JRG21,... Probable 2-oxoglutarate-dependent dioxygenase JRG21... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 42 139
No external refs found!