Gb_15878

Description : transcription factor (mTERF)

Gene families : OG0000165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_15878
Cluster	HCCA: Cluster_61

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00116710	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.05	OrthoFinder output from all 47 species
AMTR_s00010p00117910	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.06	OrthoFinder output from all 47 species
AMTR_s00010p00224530	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s00010p00225110	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
AMTR_s00010p00225250	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s00010p00225430	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s00010p00230750	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.05	OrthoFinder output from all 47 species
AMTR_s00010p00235760	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
AMTR_s00010p00236880	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.06	OrthoFinder output from all 47 species
AMTR_s00010p00237160	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
AMTR_s00010p00239860	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
AMTR_s00038p00175390	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
AMTR_s00060p00059830	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.06	OrthoFinder output from all 47 species
AMTR_s00066p00157030	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
AMTR_s00066p00157220	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.05	OrthoFinder output from all 47 species
AMTR_s00084p00087230	PTAC15,...	RNA biosynthesis.organelle...	0.06	OrthoFinder output from all 47 species
AMTR_s00126p00036100	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.06	OrthoFinder output from all 47 species
AMTR_s00126p00036130	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
AMTR_s00126p00036170	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
AMTR_s00126p00036560	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s00612p00010480	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s00871p00002780	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
AMTR_s01293p00010460	evm_27.TU.AmTr_v1...	No description available	0.04	OrthoFinder output from all 47 species
AMTR_s01360p00009540	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.07	OrthoFinder output from all 47 species
AMTR_s02857p00005060	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AT1G21150	No alias	Mitochondrial transcription termination factor family protein	0.03	OrthoFinder output from all 47 species
AT1G61980	No alias	Mitochondrial transcription termination factor family protein	0.04	OrthoFinder output from all 47 species
AT1G62110	No alias	Mitochondrial transcription termination factor family protein	0.02	OrthoFinder output from all 47 species
AT1G62150	No alias	Mitochondrial transcription termination factor family protein	0.05	OrthoFinder output from all 47 species
AT3G46950	No alias	Mitochondrial transcription termination factor family protein	0.08	OrthoFinder output from all 47 species
AT5G07900	No alias	Mitochondrial transcription termination factor family protein	0.02	OrthoFinder output from all 47 species
AT5G23930	No alias	Mitochondrial transcription termination factor family protein	0.03	OrthoFinder output from all 47 species
Ala_g05815	No alias	mTERF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Als_g18494	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g20829	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g30338	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g28360	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene64007.t1	Aspi01Gene64007	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g12846	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g14738	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.30G015700.1	Ceric.30G015700	mTERF-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g12619	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g18393	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g02967	No alias	mTERF-type transcription factor & original description: none	0.08	OrthoFinder output from all 47 species
Dcu_g05343	No alias	mTERF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g24025	No alias	mTERF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g48743	PTAC15	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g06040	EMB2219	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g13389	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g14645	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g25533	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01009012001	No alias	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
GSVIVT01022213001	No alias	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
GSVIVT01036787001	No alias	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
Gb_07257	PTAC15	TAC15 cofactor of plastid-encoded RNA polymerase....	0.06	OrthoFinder output from all 47 species
Gb_31439	No alias	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Gb_39322	No alias	transcription factor (mTERF)	0.05	OrthoFinder output from all 47 species
LOC_Os05g33440.1	LOC_Os05g33440	transcription factor (mTERF)	0.05	OrthoFinder output from all 47 species
LOC_Os05g33460.2	LOC_Os05g33460	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
LOC_Os05g34160.1	LOC_Os05g34160	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species
LOC_Os07g24090.1	LOC_Os07g24090	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
LOC_Os11g14130.1	LOC_Os11g14130	transcription factor (mTERF)	0.06	OrthoFinder output from all 47 species
LOC_Os12g30610.1	LOC_Os12g30610	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species
Len_g21383	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_192398g0010	No alias	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
MA_31885g0010	No alias	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
MA_493420g0010	No alias	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Msp_g47549	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g20233	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g35894	No alias	mTERF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g17760	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Smo77318	EMB93, SOLDAT10	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
Solyc02g067960.3.1	Solyc02g067960	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
Solyc02g082010.3.1	Solyc02g082010	transcription factor (mTERF)	0.05	OrthoFinder output from all 47 species
Solyc04g011700.2.1	Solyc04g011700	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
Solyc04g051880.3.1	Solyc04g051880	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Solyc04g072500.1.1	Solyc04g072500	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Solyc04g072530.2.1	Solyc04g072530	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Solyc04g072550.3.1	Solyc04g072550	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Tin_g21097	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e010589_P001	Zm00001e010589	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species
Zm00001e022322_P001	Zm00001e022322	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
Zm00001e027097_P001	Zm00001e027097	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species
Zm00001e031638_P001	Zm00001e031638	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003690	MTERF	113	199
IPR003690	MTERF	97	395

External Links

No external refs found!

Gb_15878

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation