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  5. Gb_15442

Gb_15442


Description : transcription factor (bHLH)


Gene families : OG0011158 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011158_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_15442

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00064p00208400 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
AT5G56960 No alias basic helix-loop-helix (bHLH) DNA-binding family protein 0.05 OrthoFinder output from all 47 species
GSVIVT01015189001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.07 OrthoFinder output from all 47 species
LOC_Os01g09990.1 LOC_Os01g09990 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
LOC_Os01g39330.1 LOC_Os01g39330 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os05g11070.1 LOC_Os05g11070 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_317126g0010 No alias transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Solyc07g039570.3.1 Solyc07g039570 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e020505_P001 Zm00001e020505 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e025985_P001 Zm00001e025985 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e027779_P001 Zm00001e027779 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 91 215
IPR011598 bHLH_dom 433 479
No external refs found!