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  5. Gb_15324

Gb_15324 (HUA1)


Aliases : HUA1

Description : C3H zinc finger transcription factor


Gene families : OG0002527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_15324

Target Alias Description ECC score Gene Family Method Actions
Ala_g14650 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Als_g62719 HUA1 regulatory protein of RNA homeostasis & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene25824.t1 HUA1, Aspi01Gene25824 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene47179.t1 HUA1, Aspi01Gene47179 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0068.g036245 HUA1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Ceric.30G016300.1 HUA1, Ceric.30G016300 regulatory protein of RNA homeostasis & original... 0.05 OrthoFinder output from all 47 species
Dde_g07395 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01036686001 HUA1 RNA biosynthesis.transcriptional activation.C3H zinc... 0.04 OrthoFinder output from all 47 species
Len_g30979 HUA1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Lfl_g29415 HUA1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Pnu_g32445 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Sam_g13535 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Spa_g15555 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 260 284
IPR000571 Znf_CCCH 315 338
IPR000571 Znf_CCCH 578 602
IPR000571 Znf_CCCH 455 480
IPR000571 Znf_CCCH 371 396
IPR000571 Znf_CCCH 630 652
IPR000571 Znf_CCCH 530 554
No external refs found!