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  5. Gb_15278

Gb_15278


Description : component NUF2 of NDC80 outer kinetochore complex


Gene families : OG0006515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_15278
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00016840 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.chromosome... 0.05 OrthoFinder output from all 47 species
Als_g16458 No alias component *(NUF2) of NDC80 outer kinetochore complex &... 0.01 OrthoFinder output from all 47 species
Aop_g04468 No alias component *(NUF2) of NDC80 outer kinetochore complex &... 0.07 OrthoFinder output from all 47 species
Ceric.38G047400.1 Ceric.38G047400 component *(NUF2) of NDC80 outer kinetochore complex &... 0.17 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.65 No alias Cell cycle.mitosis and meiosis.chromosome... 0.1 OrthoFinder output from all 47 species
Cre01.g008450 No alias Cell cycle.mitosis and meiosis.chromosome... 0.07 OrthoFinder output from all 47 species
Dcu_g10000 No alias component *(NUF2) of NDC80 outer kinetochore complex &... 0.13 OrthoFinder output from all 47 species
LOC_Os03g38010.1 LOC_Os03g38010 component NUF2 of NDC80 outer kinetochore complex 0.09 OrthoFinder output from all 47 species
Len_g08343 No alias component *(NUF2) of NDC80 outer kinetochore complex &... 0.04 OrthoFinder output from all 47 species
MA_103013g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_66453g0010 No alias component NUF2 of NDC80 outer kinetochore complex 0.05 OrthoFinder output from all 47 species
Mp3g15760.1 No alias component NUF2 of NDC80 outer kinetochore complex 0.15 OrthoFinder output from all 47 species
Ppi_g02000 No alias component *(NUF2) of NDC80 outer kinetochore complex &... 0.08 OrthoFinder output from all 47 species
Sam_g13147 No alias component *(NUF2) of NDC80 outer kinetochore complex &... 0.03 OrthoFinder output from all 47 species
Spa_g01731 No alias component *(NUF2) of NDC80 outer kinetochore complex &... 0.08 OrthoFinder output from all 47 species
Tin_g14861 No alias component *(NUF2) of NDC80 outer kinetochore complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e006361_P001 Zm00001e006361 component NUF2 of NDC80 outer kinetochore complex 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEA Interproscan
CC GO:0031262 Ndc80 complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004146 dihydrofolate reductase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009396 folic acid-containing compound biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046653 tetrahydrofolate metabolic process IEP HCCA
BP GO:0046654 tetrahydrofolate biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005549 Kinetochore_Nuf2_N 3 145
No external refs found!