Gb_15254

Description : Ribosomal protein S7, mitochondrial OS=Triticum aestivum (sp|q01902|rt07_wheat : 194.0)

Gene families : OG0003075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003075_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_15254
Cluster	HCCA: Cluster_73

Target	Alias	Description	ECC score	Gene Family Method
AT2G07696	No alias	Ribosomal protein S7p/S5e family protein	0.04	OrthoFinder output from all 47 species
ATCG00900	RPS7.1, RPS7	Ribosomal protein S7p/S5e family protein	0.05	OrthoFinder output from all 47 species
ATCG01240	RPS7.2	ribosomal protein S7	0.05	OrthoFinder output from all 47 species
ATMG01270	RPS7	mitochondrial ribosomal protein S7	0.04	OrthoFinder output from all 47 species
Aev_g27286	RPS7.1, RPS7	component *(uS7c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Als_g16999	RPS7.1, RPS7	component *(uS7c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Aob_g04218	RPS7.1, RPS7	component *(uS7c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Aob_g13505	No alias	component *(uS7m) of small mitoribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Aop_g15514	No alias	component *(uS7m) of small mitoribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Cba_g04878	RPS7.1, RPS7	component *(uS7c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Cba_g25480	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.05G040200.1	RPS7.1, RPS7,...	component *(uS7c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Ceric.05G043200.1	RPS7.1, RPS7,...	component *(uS7c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Ceric.09G049800.1	RPS7.1, RPS7,...	component *(uS7c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Ceric.18G054300.1	RPS7.1, RPS7,...	component *(uS7c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Ceric.22G078200.1	RPS7.1, RPS7,...	component *(uS7c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Ceric.29G003200.1	RPS7.1, RPS7,...	component *(uS7c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Ceric.33G038600.1	RPS7.1, RPS7,...	component *(uS7c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Dcu_g21132	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Gb_26489	No alias	Ribosomal protein S7, mitochondrial OS=Arabidopsis...	0.1	OrthoFinder output from all 47 species
Gb_37211	No alias	Ribosomal protein S7, mitochondrial OS=Marchantia...	0.16	OrthoFinder output from all 47 species
LOC_Os04g16856.1	RPS7.1, RPS7,...	component psRPS7 of small ribosomal subunit proteome	0.08	OrthoFinder output from all 47 species
LOC_Os04g16886.1	RPS7.1, RPS7,...	component psRPS7 of small ribosomal subunit proteome	0.08	OrthoFinder output from all 47 species
LOC_Os07g25002.1	RPS7.1, RPS7,...	component psRPS7 of small ribosomal subunit proteome	0.08	OrthoFinder output from all 47 species
LOC_Os08g15246.1	RPS7.1, RPS7,...	component psRPS7 of small ribosomal subunit proteome	0.08	OrthoFinder output from all 47 species
LOC_Os10g21372.1	RPS7.1, RPS7,...	component psRPS7 of small ribosomal subunit proteome	0.08	OrthoFinder output from all 47 species
LOC_Os12g34045.1	LOC_Os12g34045	component mtRPS7 of small ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Lfl_g03137	RPS7.1, RPS7	component *(uS7c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Lfl_g06400	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Nbi_g22080	No alias	component *(uS7m) of small mitoribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Pir_g04718	No alias	component *(uS7m) of small mitoribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Pir_g06433	RPS7.1, RPS7	component *(uS7c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Sam_g00356	No alias	component *(uS7m) of small mitoribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Spa_g02161	No alias	component *(uS7m) of small mitoribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Tin_g12479	No alias	component *(uS7m) of small mitoribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Zm00001e039873_P001	RPS7.1, RPS7,...	component psRPS7 of small ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006032	Ribosomal_S12/S23	42	149
IPR023798	Ribosomal_S7_dom	245	370

External Links

No external refs found!

Gb_15254

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation