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  5. Gb_14478

Gb_14478


Description : Protein JINGUBANG OS=Arabidopsis thaliana (sp|o48716|jgb_arath : 295.0)


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_14478
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00197160 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00109p00134110 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00109p00135240 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G18950 No alias Transducin/WD40 repeat-like superfamily protein 0.07 OrthoFinder output from all 47 species
Adi_g054356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g00841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16121 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47008 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene05743.t1 Aspi01Gene05743 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene23387.t1 Aspi01Gene23387 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene23389.t2 Aspi01Gene23389 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene44873.t1 Aspi01Gene44873 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010472 No alias not classified & original description: CDS=1-1746 0.04 OrthoFinder output from all 47 species
Azfi_s3305.g115285 No alias not classified & original description: CDS=1-1707 0.07 OrthoFinder output from all 47 species
Cba_g52387 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G075900.1 Ceric.12G075900 not classified & original description: pacid=50601390... 0.03 OrthoFinder output from all 47 species
Ceric.28G012600.1 Ceric.28G012600 not classified & original description: pacid=50570711... 0.04 OrthoFinder output from all 47 species
Dac_g36315 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g40515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005091001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01007589001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_26403 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_33493 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os03g52870.1 LOC_Os03g52870 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g40260.1 LOC_Os12g40260 Protein JINGUBANG OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
Len_g36542 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10429180g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_17987g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_370291g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_913477g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Mp7g17880.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Msp_g34011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10069 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61462 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005956 No alias not classified & original description: CDS=1-1941 0.02 OrthoFinder output from all 47 species
Solyc01g068250.2.1 Solyc01g068250 Protein JINGUBANG OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Solyc01g109120.3.1 Solyc01g109120 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc04g005020.3.1 Solyc04g005020 Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc05g006340.3.1 Solyc05g006340 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g06919 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Spa_g21332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30929 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005608_P001 Zm00001e005608 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e015781_P001 Zm00001e015781 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e041085_P001 Zm00001e041085 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 222 257
IPR001680 WD40_repeat 188 216
IPR001680 WD40_repeat 316 347
IPR001680 WD40_repeat 357 397
No external refs found!