- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : component RPS3 of SSU proteome
Gene families : OG0001769 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001769_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_13623 | |
| Cluster | HCCA: Cluster_161 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00219330 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.14 | OrthoFinder output from all 47 species | |
| AMTR_s00030p00157370 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.11 | OrthoFinder output from all 47 species | |
| AT2G31610 | No alias | Ribosomal protein S3 family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G53870 | No alias | Ribosomal protein S3 family protein | 0.08 | OrthoFinder output from all 47 species | |
| AT5G35530 | No alias | Ribosomal protein S3 family protein | 0.23 | OrthoFinder output from all 47 species | |
| Adi_g083363 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g13531 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g20217 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.16 | OrthoFinder output from all 47 species | |
| Als_g19714 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g10608 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g22525 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g10053 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Aop_g11605 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g18995 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.06G062500.1 | Ceric.06G062500 | component *(uS3) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.12G046300.1 | Ceric.12G046300 | component *(uS3) of small ribosomal-subunit (SSU)... | 0.16 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021462.41 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.21 | OrthoFinder output from all 47 species | |
| Cre02.g102250 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.18 | OrthoFinder output from all 47 species | |
| Dac_g04101 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g08554 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g21379 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g21380 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g20443 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g13853 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g13854 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015110001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.2 | OrthoFinder output from all 47 species | |
| GSVIVT01016775001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.2 | OrthoFinder output from all 47 species | |
| GSVIVT01035451001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.14 | OrthoFinder output from all 47 species | |
| LOC_Os03g38000.1 | LOC_Os03g38000 | component RPS3 of SSU proteome | 0.18 | OrthoFinder output from all 47 species | |
| LOC_Os07g41750.1 | LOC_Os07g41750 | component RPS3 of SSU proteome | 0.13 | OrthoFinder output from all 47 species | |
| Lfl_g25979 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10436283g0010 | No alias | component RPS3 of SSU proteome | 0.11 | OrthoFinder output from all 47 species | |
| MA_120861g0010 | No alias | component RPS3 of SSU proteome | 0.15 | OrthoFinder output from all 47 species | |
| Mp1g16730.1 | No alias | component RPS3 of SSU proteome | 0.22 | OrthoFinder output from all 47 species | |
| Msp_g00955 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Msp_g08961 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g02786 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g11610 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Pp3c11_22640V3.1 | Pp3c11_22640 | Ribosomal protein S3 family protein | 0.19 | OrthoFinder output from all 47 species | |
| Pp3c15_21360V3.1 | Pp3c15_21360 | Ribosomal protein S3 family protein | 0.07 | OrthoFinder output from all 47 species | |
| Pp3c16_3760V3.1 | Pp3c16_3760 | Ribosomal protein S3 family protein | 0.06 | OrthoFinder output from all 47 species | |
| Pp3c5_5330V3.1 | Pp3c5_5330 | Ribosomal protein S3 family protein | 0.13 | OrthoFinder output from all 47 species | |
| Pp3c7_2620V3.1 | Pp3c7_2620 | Ribosomal protein S3 family protein | 0.12 | OrthoFinder output from all 47 species | |
| Pp3c9_12170V3.1 | Pp3c9_12170 | Ribosomal protein S3 family protein | 0.16 | OrthoFinder output from all 47 species | |
| Ppi_g22437 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0049.g013681 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.14 | OrthoFinder output from all 47 species | |
| Sam_g27041 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.19 | OrthoFinder output from all 47 species | |
| Smo270414 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Smo270666 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Smo438700 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc07g041310.3.1 | Solyc07g041310 | component RPS3 of SSU proteome | 0.15 | OrthoFinder output from all 47 species | |
| Solyc08g061843.1.1 | Solyc08g061843 | component RPS3 of SSU proteome | 0.19 | OrthoFinder output from all 47 species | |
| Spa_g10670 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g10671 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g10672 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.14 | OrthoFinder output from all 47 species | |
| Spa_g21286 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g30478 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.2 | OrthoFinder output from all 47 species | |
| Spa_g51511 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g54393 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g04971 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.14 | OrthoFinder output from all 47 species | |
| Tin_g05397 | No alias | component *(uS3) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e021687_P001 | Zm00001e021687 | component RPS3 of SSU proteome | 0.19 | OrthoFinder output from all 47 species | |
| Zm00001e035528_P001 | Zm00001e035528 | component RPS3 of SSU proteome | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e040177_P002 | Zm00001e040177 | component RPS3 of SSU proteome | 0.17 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |