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  5. Gb_13421

Gb_13421


Description : component PWR of HDA9-PWR deacetylation complex


Gene families : OG0001343 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001343_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_13421

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00108p00114900 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.04 OrthoFinder output from all 47 species
AT3G52250 No alias Duplicated homeodomain-like superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g093352 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11479 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.05 OrthoFinder output from all 47 species
Ala_g19843 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.07 OrthoFinder output from all 47 species
Cba_g71610 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Ceric.14G077400.1 Ceric.14G077400 component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Ceric.15G065000.1 Ceric.15G065000 component *(PWR) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
Ceric.38G019400.1 Ceric.38G019400 component *(PWR) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
Cre06.g264400 No alias Chromatin organisation.histone modifications.histone... 0.01 OrthoFinder output from all 47 species
Dac_g39968 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g04157 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g17925 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.05 OrthoFinder output from all 47 species
GSVIVT01016309001 No alias Chromatin organisation.histone modifications.histone... 0.05 OrthoFinder output from all 47 species
LOC_Os05g03550.1 LOC_Os05g03550 component PWR of HDA9-PWR deacetylation complex 0.03 OrthoFinder output from all 47 species
MA_104862g0010 No alias component PWR of HDA9-PWR deacetylation complex 0.03 OrthoFinder output from all 47 species
MA_12404g0020 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_14319g0010 No alias component PWR of HDA9-PWR deacetylation complex 0.04 OrthoFinder output from all 47 species
MA_9049830g0010 No alias component PWR of HDA9-PWR deacetylation complex 0.04 OrthoFinder output from all 47 species
Mp1g21450.1 No alias component PWR of HDA9-PWR deacetylation complex 0.02 OrthoFinder output from all 47 species
Msp_g19128 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Nbi_g01519 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.02 OrthoFinder output from all 47 species
Nbi_g06341 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Pir_g13639 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
Sam_g08924 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
Solyc04g049120.4.1 Solyc04g049120 component PWR of HDA9-PWR deacetylation complex 0.02 OrthoFinder output from all 47 species
Zm00001e029482_P006 Zm00001e029482 component PWR of HDA9-PWR deacetylation complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 1371 1412
No external refs found!