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  5. Gb_13366

Gb_13366 (ESP1)


Aliases : ESP1

Description : component ESP1 of Cleavage Stimulatory Factor (CstF) complex


Gene families : OG0001642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_13366

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0245.g059945 CSTF64 component *(CstF64/Rna15) of Cleavage Stimulatory Factor... 0.03 OrthoFinder output from all 47 species
Ceric.11G063300.1 ESP1, Ceric.11G063300 component *(ESP1) of Cleavage Stimulatory Factor (CstF)... 0.03 OrthoFinder output from all 47 species
Ceric.32G017200.1 CSTF64, Ceric.32G017200 component *(CstF64/Rna15) of Cleavage Stimulatory Factor... 0.03 OrthoFinder output from all 47 species
Cre01.g024200 CSTF64 RNA processing.RNA 3-end polyadenylation.Cleavage... 0.01 OrthoFinder output from all 47 species
LOC_Os05g43780.1 ESP1, LOC_Os05g43780 component ESP1 of Cleavage Stimulatory Factor (CstF) complex 0.04 OrthoFinder output from all 47 species
Ore_g15576 ESP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07153 No alias component *(ESP1) of Cleavage Stimulatory Factor (CstF)... 0.03 OrthoFinder output from all 47 species
Solyc03g119460.4.1 ESP1, Solyc03g119460 component ESP1 of Cleavage Stimulatory Factor (CstF) complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025742 CSTF2_hinge 23 90
No external refs found!