Aliases : CRR22
Description : RNA editing factor (MEF19)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
GSVIVT01011501001 | No alias | Pentatricopeptide repeat-containing protein At5g39350... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01018098001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01025639001 | No alias | Pentatricopeptide repeat-containing protein At3g53360,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01029347001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01033837001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Gb_04402 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.07 | OrthoFinder output from all 47 species | |
Gb_06115 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.06 | OrthoFinder output from all 47 species | |
Gb_09410 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_18979 | OTP84 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
Gb_30097 | CRR22 | RNA editing factor (CRR21) | 0.06 | OrthoFinder output from all 47 species | |
Gb_30147 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.06 | OrthoFinder output from all 47 species | |
Gb_32447 | REME1 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.07 | OrthoFinder output from all 47 species | |
Gb_37554 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os03g56850.1 | LOC_Os03g56850 | Pentatricopeptide repeat-containing protein At4g21300... | 0.04 | OrthoFinder output from all 47 species | |
MA_10357393g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
MA_10428121g0010 | REME1 | Pentatricopeptide repeat-containing protein At4g37170... | 0.04 | OrthoFinder output from all 47 species | |
MA_10429540g0020 | LOI1, MEF11 | Pentatricopeptide repeat-containing protein At4g14850... | 0.05 | OrthoFinder output from all 47 species | |
MA_107723g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
MA_124907g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
MA_131437g0010 | No alias | RNA editing factor (MEF3) | 0.05 | OrthoFinder output from all 47 species | |
MA_16339g0010 | CRR2 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
MA_174226g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
MA_179801g0020 | EMB2261 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
MA_18277g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g39530... | 0.03 | OrthoFinder output from all 47 species | |
MA_20899g0020 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
MA_385322g0010 | OTP82 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_392600g0010 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.04 | OrthoFinder output from all 47 species | |
MA_412g0010 | REME1 | Pentatricopeptide repeat-containing protein At2g13600... | 0.05 | OrthoFinder output from all 47 species | |
MA_445076g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
MA_480955g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
MA_483636g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
MA_52613g0020 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
MA_65500g0010 | No alias | Pentatricopeptide repeat-containing protein At1g08070,... | 0.04 | OrthoFinder output from all 47 species | |
MA_68718g0020 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
MA_68933g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.04 | OrthoFinder output from all 47 species | |
MA_79624g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
MA_81105g0010 | REME1 | RNA editing factor (OTP82) | 0.04 | OrthoFinder output from all 47 species | |
MA_8319g0010 | CRR2 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.04 | OrthoFinder output from all 47 species | |
MA_8868720g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
MA_9463538g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
MA_957690g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.07 | OrthoFinder output from all 47 species | |
Smo105776 | CRR2 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.04 | OrthoFinder output from all 47 species | |
Smo70138 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e010837_P001 | LPA66, Zm00001e010837 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e031660_P001 | Zm00001e031660 | Pentatricopeptide repeat-containing protein At4g14170... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e035654_P001 | EMB2758, Zm00001e035654 | Pentatricopeptide repeat-containing protein At4g33990... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e037600_P001 | Zm00001e037600 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 702 | 725 |
IPR002885 | Pentatricopeptide_repeat | 298 | 323 |
IPR002885 | Pentatricopeptide_repeat | 222 | 270 |
IPR002885 | Pentatricopeptide_repeat | 425 | 473 |
IPR002885 | Pentatricopeptide_repeat | 626 | 674 |
IPR002885 | Pentatricopeptide_repeat | 525 | 573 |
IPR002885 | Pentatricopeptide_repeat | 324 | 370 |
IPR002885 | Pentatricopeptide_repeat | 122 | 169 |
IPR032867 | DYW_dom | 801 | 924 |
No external refs found! |