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Aliases : EMB3010, RPS6B
Description : component RPS6 of SSU proteome
Gene families : OG0001926 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001926_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_13281 | |
| Cluster | HCCA: Cluster_161 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00038p00238890 | RPS6A, RPS6,... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00048p00058600 | RPS6A, RPS6,... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00077p00035710 | RPS6A, RPS6,... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.15 | OrthoFinder output from all 47 species | |
| AT4G31700 | RPS6A, RPS6 | ribosomal protein S6 | 0.23 | OrthoFinder output from all 47 species | |
| AT5G10360 | EMB3010, RPS6B | Ribosomal protein S6e | 0.19 | OrthoFinder output from all 47 species | |
| Adi_g043403 | RPS6A, RPS6 | component *(eS6) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g113028 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g13323 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g27846 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g39017 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g11616 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g03931 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g06817 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Aop_g54144 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene03442.t1 | EMB3010, RPS6B,... | component *(eS6) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0114.g046096 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0350.g066542 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Cba_g06428 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.16G007200.1 | EMB3010, RPS6B,... | component *(eS6) of small ribosomal-subunit (SSU)... | 0.16 | OrthoFinder output from all 47 species | |
| Ceric.32G000200.1 | EMB3010, RPS6B,... | component *(eS6) of small ribosomal-subunit (SSU)... | 0.11 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000704.73 | EMB3010, RPS6B | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.15 | OrthoFinder output from all 47 species | |
| Cre09.g400650 | EMB3010, RPS6B | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.14 | OrthoFinder output from all 47 species | |
| Dac_g12343 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.11 | OrthoFinder output from all 47 species | |
| Dac_g32094 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.15 | OrthoFinder output from all 47 species | |
| Dcu_g12801 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g34811 | RPS6A, RPS6 | component *(eS6) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g07539 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g25782 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009072001 | EMB3010, RPS6B | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01015776001 | EMB3010, RPS6B | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os03g27260.1 | EMB3010, RPS6B,... | component RPS6 of SSU proteome | 0.18 | OrthoFinder output from all 47 species | |
| LOC_Os07g42950.1 | EMB3010, RPS6B,... | component RPS6 of SSU proteome | 0.17 | OrthoFinder output from all 47 species | |
| Len_g12022 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| MA_10426804g0010 | RPS6A, RPS6 | component RPS6 of SSU proteome | 0.2 | OrthoFinder output from all 47 species | |
| MA_72828g0010 | EMB3010, RPS6B | component RPS6 of SSU proteome | 0.18 | OrthoFinder output from all 47 species | |
| Mp4g01750.1 | EMB3010, RPS6B | component RPS6 of SSU proteome | 0.23 | OrthoFinder output from all 47 species | |
| Msp_g39312 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Nbi_g19907 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g05921 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g26609 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c15_25430V3.1 | EMB3010, RPS6B,... | Ribosomal protein S6e | 0.1 | OrthoFinder output from all 47 species | |
| Pp3c15_25780V3.1 | EMB3010, RPS6B,... | Ribosomal protein S6e | 0.11 | OrthoFinder output from all 47 species | |
| Ppi_g09534 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g19004 | No alias | component *(eS6) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g19005 | No alias | component *(eS6) of small ribosomal-subunit (SSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Sam_g25389 | No alias | component *(eS6) of small ribosomal-subunit (SSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Smo172795 | EMB3010, RPS6B | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.14 | OrthoFinder output from all 47 species | |
| Solyc08g006040.3.1 | RPS6A, RPS6,... | component RPS6 of SSU proteome | 0.15 | OrthoFinder output from all 47 species | |
| Solyc08g074240.3.1 | RPS6A, RPS6,... | component RPS6 of SSU proteome | 0.23 | OrthoFinder output from all 47 species | |
| Solyc12g096300.2.1 | EMB3010, RPS6B,... | component RPS6 of SSU proteome | 0.2 | OrthoFinder output from all 47 species | |
| Spa_g10201 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Spa_g12883 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Spa_g17271 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.16 | OrthoFinder output from all 47 species | |
| Tin_g00509 | EMB3010, RPS6B | component *(eS6) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e010802_P001 | EMB3010, RPS6B,... | component RPS6 of SSU proteome | 0.17 | OrthoFinder output from all 47 species | |
| Zm00001e035580_P002 | EMB3010, RPS6B,... | component RPS6 of SSU proteome | 0.16 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |